Gene
RNA
| Item | Value |
|---|---|
| gene id | G106994 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 25795413 ~ 25795612 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133824 | True | 200 | lncRNA | 0.51 | 1 | 25795413 | 25795612 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011458 | NA | coding | upstream | 29335 | 25761836 ~ 25766078 (+) |
| AMCG00011452 | NA | coding | upstream | 624217 | 25170708 ~ 25171196 (+) |
| AMCG00011453 | NA | coding | upstream | 624743 | 25169500 ~ 25170670 (+) |
| AMCG00011449 | NA | coding | upstream | 680920 | 25106328 ~ 25114493 (+) |
| AMCG00011451 | ddx41 | coding | upstream | 690308 | 25094529 ~ 25105105 (+) |
| AMCG00011461 | NA | coding | downstream | 7300 | 25802912 ~ 25811978 (+) |
| AMCG00011460 | NA | coding | downstream | 53961 | 25849573 ~ 25877546 (+) |
| AMCG00011462 | dusp1 | coding | downstream | 117912 | 25913524 ~ 25916673 (+) |
| AMCG00011464 | neurl1b | coding | downstream | 210282 | 26005894 ~ 26011894 (+) |
| AMCG00011466 | NA | coding | downstream | 238620 | 26034232 ~ 26035368 (+) |
| G106973 | NA | non-coding | upstream | 74827 | 25698252 ~ 25720586 (+) |
| G106966 | NA | non-coding | upstream | 117994 | 25674416 ~ 25677419 (+) |
| G106961 | NA | non-coding | upstream | 127631 | 25666124 ~ 25667782 (+) |
| G106947 | NA | non-coding | upstream | 423668 | 25371479 ~ 25371745 (+) |
| G106946 | NA | non-coding | upstream | 457646 | 25337552 ~ 25337767 (+) |
| G107004 | ergic1 | non-coding | downstream | 87080 | 25882692 ~ 25888838 (+) |
| G107084 | NA | non-coding | downstream | 404338 | 26199950 ~ 26202619 (+) |
| G107098 | NA | non-coding | downstream | 481762 | 26277374 ~ 26292447 (+) |
| G107126 | NA | non-coding | downstream | 592136 | 26387748 ~ 26387984 (+) |
| G107128 | NA | non-coding | downstream | 651590 | 26447202 ~ 26451575 (+) |
| AMCG00011455 | unc5a,LOC107677380,LOC107653334 | other | upstream | 133234 | 25607986 ~ 25662179 (+) |
| AMCG00011430 | dctn4,LOC107749746,LOC106604160 | other | upstream | 1950502 | 23835819 ~ 23844911 (+) |
| G106711 | zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 | other | upstream | 2042411 | 23748674 ~ 23753002 (+) |
| G106618 | NA | other | upstream | 2438854 | 23356062 ~ 23356559 (+) |
| G106613 | NA | other | upstream | 2453648 | 23341308 ~ 23341765 (+) |
| AMCG00011476 | NA | other | downstream | 560555 | 26356167 ~ 26360775 (+) |
| G107202 | NA | other | downstream | 974826 | 26770438 ~ 26771214 (+) |
| AMCG00011488 | NA | other | downstream | 1022440 | 26818052 ~ 26842792 (+) |
| G107394 | NA | other | downstream | 1916594 | 27712206 ~ 27727867 (+) |
| AMCG00011519 | NA | other | downstream | 3073530 | 28869142 ~ 28876355 (+) |
