AMCG00011993


Basic Information

Item Value
gene id AMCG00011993
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8028063 ~ 8037681 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011993
CAGAAGGCATTTGATGAGTGTGGAGAGTTTGCCTCCGTGAAGTACCAGGTGGAGGAGGACCAGGATAAGAAAGGCTTCGATGGCTTTGTCATCCTCCACGGGACCGACACCCTGGCCTACACCTCCTCAGCTCTGTCCTTCCTGCTGCAGGGACTGAACAAGCCTGTGGTGGTGACTGGGGCACAGAGGTCTCTGTTTGAGCCGCGCTCCGATGCCGTCAGCAACATCCTGGGCTCTCTGCTGATCGCCGGCTGCTACTGCAAGAACCCCGCGCTGCAGCAGgtgtgcGTGTTCTTTCACAACAAGCTCTTCCAGGGGAACCGAGTCCAAAAGTCTGACTGTGATGCCTTTGATGCCTTTGACTCCCCCAACATGGAGCCGCTGGCTGTGTTTGGTCCAACCATAAAGGTCTCCCTCCATCAGTCTGCTCCCTGTGTTGCAGTGGACACTTCCCAGCCTGTGCTGCTGTTCCCCCTCAAAAAGAGATGTGACAAGGTGCCTGTCACCAGAGTCCTGCGCATCTTCCCAGGGATCAGCAAGTCCTGCGTGAACAACTTCCTGGCCCAGGCTGACGGGATCGTCCTGCAGACGTACGGAAATGGCAACGCCCCCGAGGAGGACTGGTTCTCTGAGGCCCTGAAGCGCGCGACTGACCACGGCGTTCTCATCATCAACTGCACGCAGGTCCACCGGGGATCTGTCAGGCCAATCTACGAGGCTGGAGATtggcTGAAGAAGGCTGGGGTGCTGTCTGGGTATGACATCACCACTGAAGCGGCTCTGACCAAGATGCAGTGGGTCCTGCAGCACTTTGAGAGCAAGGAATGGTGCAAGGTGATGCAGATGAGTGTCTGTGGGGAGATGACCATCATCCCAGAGCCTATGCGCAATGGCTGTGAGGATGCTGGCCCTGCCTGGTGTTGTCTACGGTATCTCCATACAGTTATCTCATCACCAAAGCCGGGACTGCACAagccctgaccaccttctggcgattactcaagattactgtaatacagcagcATATTCTGCTGCGCTGCTCAGCACTCCGGCTattatgcactttattaaactatgcCTCCTTATGCTCTCTTGTActaatgtattgttagcacttctttACAATAATTGCAACATCAAAATAAAGCCTGC
>TU167865
TGAACTCGGCCTGTTTCCGACCACTTCTTCCACACACTGCTTTTTGGACCTctatctccctgtctttccACGCCCTATGGgagAACATCCAGGAGAACCAGGCAAATTCACCAAGGAGCTCCAAAGGCACCCTGAGCTCTACAGCAAGGAGGACAATGGGTGGTTCCATCTGCCGCAGAAGGCATTTGATGAGTGTGGAGAGTTTGCCTCCGTGAAGTACCAGGTGGAGGAGGTGCCCAAGCCCATCGACTCCTCCAAGATGACTCCAGCAGACTGGGAAAACATTGCCCACAAGATCTTGGACCAGGATAAGAAAGGCTTCGATGGCTTTGTCATCCTCCACGGGACCGACACCCTGGCCTACACCTCCTCAGCTCTGTCCTTCCTGCTGCAGGGACTGAACAAGCCTGTGGTGGTGACTGGGGCACAGAGGTCTCTGTTTGAGCCGCGCTCCGATGCCGTCAGCAACATCCTGGGCTCTCTGCTGATCGCCGGCTGCTACTGCAAGAACCCCGCGCTGCAGCAGAACCTTCTTTGCTCAGTGCTCCaggacatctctctctctctctctctctctctctctc

Function

GO: NA

KEGG:

id description
K01424 E3.5.1.1, ansA, ansB; L-asparaginase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011993 True 1152 mRNA 0.55 9 8029486 8037681
TU167865 False 584 TUCP 0.56 6 8028063 8032609

Neighbor

gene id symbol gene type direction distance location
AMCG00011994 NA coding upstream 3002 8020804 ~ 8025061 (+)
AMCG00011992 NA coding upstream 11176 7999228 ~ 8016887 (+)
AMCG00011985 NA coding upstream 73050 7931795 ~ 7955013 (+)
AMCG00011980 NA coding upstream 143802 7878175 ~ 7884261 (+)
AMCG00011981 NA coding upstream 207671 7816096 ~ 7820392 (+)
AMCG00012005 NA coding downstream 360345 8398026 ~ 8401203 (+)
AMCG00012004 NA coding downstream 388339 8426020 ~ 8428680 (+)
AMCG00012007 NA coding downstream 426524 8464205 ~ 8468828 (+)
AMCG00012010 NA coding downstream 549449 8587130 ~ 8587981 (+)
AMCG00012011 NA coding downstream 557335 8595016 ~ 8601876 (+)
G133820 NA non-coding upstream 24551 8002780 ~ 8003512 (+)
G133783 NA non-coding upstream 184592 7830564 ~ 7843471 (+)
G133665 NA non-coding upstream 452898 7551295 ~ 7575165 (+)
G133681 NA non-coding upstream 471351 7545283 ~ 7556712 (+)
G133682 NA non-coding upstream 480308 7546644 ~ 7547755 (+)
G133825 NA non-coding downstream 24912 8062593 ~ 8117249 (+)
G133832 NA non-coding downstream 42074 8079755 ~ 8100437 (+)
G133833 NA non-coding downstream 83218 8120899 ~ 8124699 (+)
G133921 NA non-coding downstream 159138 8196819 ~ 8197029 (+)
G133947 NA non-coding downstream 238694 8276375 ~ 8276580 (+)
AMCG00011986 LOC107376962,LOC107102122,LOC103472755,LOC103153162,LOC106951371,LOC106916934 other upstream 51966 7960698 ~ 7976097 (+)
AMCG00011987 NA other upstream 99825 7925136 ~ 7928238 (+)
AMCG00011971 NA other upstream 452871 7559663 ~ 7575192 (+)
G133667 NA other upstream 519312 7505082 ~ 7508751 (+)
G133619 NA other upstream 785763 7236941 ~ 7242300 (+)
G133822 NA other downstream 14443 8052124 ~ 8055021 (+)
AMCG00012006 NA other downstream 340652 8378333 ~ 8397041 (+)
AMCG00012008 NA other downstream 472330 8510011 ~ 8520648 (+)
G133974 NA other downstream 523361 8561042 ~ 8563214 (+)
AMCG00012043 NA other downstream 1242307 9279988 ~ 9309931 (+)

Expression


Co-expression Network