G133667


Basic Information

Item Value
gene id G133667
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 7505082 ~ 7508751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167653
CTCTTCCCCTCAGCTACCCTTCCCAGTGGGGCGGCGTCATCGACGGGAAACCTTGCACCTCAGGTCTAGAGGTGTTCAGGAAAGCCGTCCTGGATGACCTCTGGGAGGCGCTGTTGGAGCAGTTTGTGCAGGAAGACGAGGGCTCAGAGGCGGGCTCAGAGGTCACCGAGCAGGAAGTATACCAGGAAGCCCAGCAGCGGAAGTGTCAGGGGCTGAGGAAGCTGGTCGCCACTGCTGCCGGCAAAATCCGAGAGTCTGGGAAGGGAGGGCCGGTGCTTGTCCATGGCGGTCCCGGGGAGGGGAAGACAGTTTTTATGGCCGCGCTGGCTAATGAGCTCAAGTGCCCGTCAGGCAAGACCCCCTCCTACgatgtcattttcttttttttgcggTTCCAGGGAAAAGATCATTGATTAA
>TU167656
CTCTTCCCCTCAGCTACCCTTCCCAGTGGGGCGGCGTCATCGACGGGAAACCTTGCACCTCAGGTCTAGAGGTGTTCAGGAAAGCCGTCCTGGATGACCTCTGGGAGGCGCTGTTGGAGCAGTTTGTGCAGGAAGACGAGGGCTCAGAGGCGGGCTCAGAGGTCACCGAGCAGGAAGTATACCAGGAAGCCCAGCAGCGGAAGTGTCAGGGGCTGAGGAAGCTGGTCGCCACTGCTGCCGGCAAAATCCGAGAGTCTGGGAAGGGAGGGCCGGTGCTTGTCCATGGCGGTCCCGGGGAGGGGAAGACAGTTTTTATGGCCGCGCTGGCTAATGAGCTCAAGTGCCCGTCAGGGAACTGCTGGCGGATTTTCACACCCAGCTGGATGCACTCTGCGTTGCCCGGAAAAAACAGCTGCTGGCCATTCTGGTCGATGGGGCGGACTGCCTGCAGGATGCCCAGGGCCAGTCGGTCTCTGACTGGATCCCACAGCACCTCCCTCAGGTCTGAGAGAGCAAGACCTGTACTCCCTACTGTGCATGTGCAAAACACTGGCCACCAGAAGTGGGGAGGAGCCTGCCTGGCAGGAAGTGATGCGTGCAGCGAGGCAACCCGAGAGCCGCATCCCATTGGCAACCTTTTCAGAGCTGGCCCGGACTATGCAGAGCATGATTGGCCAGTCTGACATCCAAGACCCGGACTCCCGTTTCCTTCTGGCCAATGACGATGTAAGATCAGCTTTTGAGGAGCAGTTTCTGATAAGCCAGGAAGCAGGGAGAAGGACCCACCTTCTGCTGGCAGCTCACCTCTGGACACTGGCTGACCCAGGTGGCAGAGACCGCTTCCTGCACTGCGAGGCCGCAGCCCTCCGTCACCTGCCGTTCCACCTGCCCATCAGAACTAActctgctaaaaataaatgaataaGTGAAGGGGGGCCAGCCAGCTGTCCTGCACTCCCTGCTGTCCAGTTTCCATTTCCTGCATGCCCATGTCCGGCTTGGCCTCCTCACCCATCTGCTGGACACCTGTCTGATTCCTCAATGGAGTTGGAAGATGGGGTGACCCATGGTGAGCTGGAGGCGTGCCATGATTTTCTGCGTCGCCACGCCCCCATCCTCTCCTATTGGCCGGCACTCTTTGTCCAGCAAGCTCTCAATGAACCTGAGGGCTGCGCCGCCCAAGTCTGGGCCCAAGGGATTGTGGGAAGGGAGACGGGCTCTGTGCGCTTGCTGAGGTGGCTGAACAAGCCACACGAAATCCAAAAGAAGGCCACGTAAGGATCAATTGACACAGTCACCACTTTTCACTCTGTGCCAACCTGTGTGAGCGTGCAGCCGAAGGGCAGACTGGCAGTTGTGGGAACTGNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167653 False 417 lncRNA 0.59 3 7505082 7506119
TU167656 True 1369 TUCP 0.59 10 7505082 7508751

Neighbor

gene id symbol gene type direction distance location
AMCG00011960 NA coding upstream 23452 7471715 ~ 7481630 (+)
AMCG00011961 NA coding upstream 53411 7441388 ~ 7451671 (+)
AMCG00011962 NA coding upstream 121112 7382975 ~ 7383970 (+)
AMCG00011963 NA coding upstream 131547 7371184 ~ 7373535 (+)
AMCG00011958 NA coding upstream 144018 7346950 ~ 7361064 (+)
AMCG00011968 NA coding downstream 68605 7577356 ~ 7578348 (+)
AMCG00011972 NA coding downstream 90757 7599508 ~ 7683253 (+)
AMCG00011977 NA coding downstream 186262 7695013 ~ 7754715 (+)
AMCG00011976 NA coding downstream 270475 7779226 ~ 7782991 (+)
AMCG00011975 NA coding downstream 277099 7785850 ~ 7788725 (+)
G133642 NA non-coding upstream 150117 7354370 ~ 7354965 (+)
G133617 NA non-coding upstream 290620 7214235 ~ 7214462 (+)
G133583 NA non-coding upstream 386232 7118297 ~ 7118850 (+)
G133574 NA non-coding upstream 392015 7112364 ~ 7113067 (+)
G133577 NA non-coding upstream 409155 7095554 ~ 7095927 (+)
G133669 NA non-coding downstream 998 7509749 ~ 7519294 (+)
G133681 NA non-coding downstream 36532 7545283 ~ 7556712 (+)
G133682 NA non-coding downstream 37893 7546644 ~ 7547755 (+)
G133665 NA non-coding downstream 42544 7551295 ~ 7575165 (+)
G133783 NA non-coding downstream 321813 7830564 ~ 7843471 (+)
G133619 NA other upstream 262782 7236941 ~ 7242300 (+)
AMCG00011948 NA other upstream 364950 7135868 ~ 7140132 (+)
AMCG00011917 NA other upstream 851351 6644876 ~ 6653731 (+)
AMCG00011909 ccnb1ip1 other upstream 944420 6545388 ~ 6560662 (+)
G133327 NA other upstream 1015874 6483947 ~ 6489208 (+)
AMCG00011971 NA other downstream 50912 7559663 ~ 7575192 (+)
AMCG00011987 NA other downstream 416385 7925136 ~ 7928238 (+)
AMCG00011986 LOC107376962,LOC107102122,LOC103472755,LOC103153162,LOC106951371,LOC106916934 other downstream 451947 7960698 ~ 7976097 (+)
AMCG00011993 NA other downstream 519312 8028063 ~ 8037681 (+)
G133822 NA other downstream 543373 8052124 ~ 8055021 (+)

Expression


Co-expression Network