AMCG00011975


Basic Information

Item Value
gene id AMCG00011975
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 7785850 ~ 7788725 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011975
ATGACACACAACATGTTCCAGGAGGGGCTGTACCATGTGTTCTTCAAGGAGAAGTCGGCCAGGCAGTCCTCCCCACAGGGCAGCAGCCCGCAGGAGCTCAGGGAGATTAGGATAGCCCGGTGGTTCGGGACGGTGgtggTCCAGATCCTCGGCGCCGTGGCAATCATGCTCTGCACCGTGGCCTTCGCCTGCATGGATTTTGGATGCGCTGTCTCCATGACGACGCCTGTGTGGTGCGGGATCTGTTACTTGGCCACGGGAAGTTTTGCATTCGAAGTGCAGAGGAAACCAAAGAAGATTAAAGTGACAGTGCTGATGGGGCTCAATGTCTTCAGCCTGCTCCTGGGCCTGTGCGCAATCATCACCTACAGCCTGCACATAGTGTCAGAGCCCAAAGCACTCTCCAGAGAACAGAAAATTGGTGCCTATGTGGCCAAAGGCAGCTCGATCTTCTTCACTCTTCAGTGCCTCATCACCTCCTGCTACACCCTGTTCCTGATCTGGAGAGGAGTCAGCCGGTACTCCCTCAACTATCGTCCCACTTACAGCCGGGTGGCGCAGGTGAGGGATCCCCGGACTGGCTGGGCTGCGAGGGACCTATTCGGTCTACAGGGAGAACAGGCCCCCCGGTCACGTAGCAGTTGACGCAACACACACATAGGCCAGCCATCGCACCAGGAAATCACTCCCTGGCACAGGGTGTTTTACAACAATGCTGCCTGGTATGCAAACACAGAGATCTTGAGGGACGGGGATGTACATCCTTAAAATAGCATAGGAAGAGAATGTTCCCTAATTGCACAAGCAACTGCCCTACTGCGAGCCAATCTCTGTAAGTCGTACTGGGGGGCCACAGTGACCGGCTAACACAGCCAGTTAATAAGTCTTGGGAAGAGCAGATTGTGTCTATTAAGGGGGGAATGGGCCTTGGGCTGGATTACTGAAGCAGACCATTCTTGGGTTCCCAGGCTTCTAAATAAGTACAAGTTACCATGTTACCCAGGTCTGTGTCTCCCTGTGCCAAGGAAACTCTGCAAATGTACGCTCTAAACAAATGAACAGTTAGGGaaagaatgcaaaataaataaaacccagtgGAGCTCATCCTTTTCTCTTATGTTTCCCCCATCACCTGATGGCGTGCAAATAAGATCTCAGCTTGGACAGTCGCCAGCAGAGCTGTGCTAGCTTCTGTACTCCAGACAGAGCACTGGGAAAgcaatggaaacaaataaaaacacacttaaataaaacaaatttgtcTTGATCTTTCGTGCTCTCTCTCCACCAGCGGGAAGCGGACGATAATGCAGCCGATCTACTGGATGGCGAGGAATTCAGTCTGTGATgcctgcccccaccccctcctcctcctcgctaATTTATTTGCTGTAAAATGGTGAAGATTAATAAACCTGCGGActgtt

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0006811 ion transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0035725 sodium ion transmembrane transport biological_process

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011975 True 1427 mRNA 0.52 5 7785850 7788725

Neighbor

gene id symbol gene type direction distance location
AMCG00011976 NA coding upstream 2859 7779226 ~ 7782991 (+)
AMCG00011977 NA coding upstream 31135 7695013 ~ 7754715 (+)
AMCG00011972 NA coding upstream 102597 7599508 ~ 7683253 (+)
AMCG00011968 NA coding upstream 207502 7577356 ~ 7578348 (+)
AMCG00011960 NA coding upstream 304220 7471715 ~ 7481630 (+)
AMCG00011979 NA coding downstream 2288 7791013 ~ 7803080 (+)
AMCG00011981 NA coding downstream 27371 7816096 ~ 7820392 (+)
AMCG00011980 NA coding downstream 89450 7878175 ~ 7884261 (+)
AMCG00011985 NA coding downstream 143070 7931795 ~ 7955013 (+)
AMCG00011992 NA coding downstream 210503 7999228 ~ 8016887 (+)
G133665 NA non-coding upstream 210685 7551295 ~ 7575165 (+)
G133681 NA non-coding upstream 229138 7545283 ~ 7556712 (+)
G133682 NA non-coding upstream 238095 7546644 ~ 7547755 (+)
G133669 NA non-coding upstream 266556 7509749 ~ 7519294 (+)
G133642 NA non-coding upstream 430885 7354370 ~ 7354965 (+)
G133783 NA non-coding downstream 41839 7830564 ~ 7843471 (+)
G133820 NA non-coding downstream 214055 8002780 ~ 8003512 (+)
G133825 NA non-coding downstream 273868 8062593 ~ 8117249 (+)
G133832 NA non-coding downstream 291030 8079755 ~ 8100437 (+)
G133833 NA non-coding downstream 332174 8120899 ~ 8124699 (+)
AMCG00011971 NA other upstream 210658 7559663 ~ 7575192 (+)
G133667 NA other upstream 277099 7505082 ~ 7508751 (+)
G133619 NA other upstream 543550 7236941 ~ 7242300 (+)
AMCG00011948 NA other upstream 645718 7135868 ~ 7140132 (+)
AMCG00011917 NA other upstream 1132119 6644876 ~ 6653731 (+)
AMCG00011987 NA other downstream 136411 7925136 ~ 7928238 (+)
AMCG00011986 LOC107376962,LOC107102122,LOC103472755,LOC103153162,LOC106951371,LOC106916934 other downstream 171973 7960698 ~ 7976097 (+)
AMCG00011993 NA other downstream 239338 8028063 ~ 8037681 (+)
G133822 NA other downstream 263399 8052124 ~ 8055021 (+)
AMCG00012006 NA other downstream 589608 8378333 ~ 8397041 (+)

Expression


Co-expression Network