AMCG00012143


Basic Information

Item Value
gene id AMCG00012143
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11657389 ~ 11671798 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012143
ATGCTGACTGATCAGGGAGCCTCCACAGATGtGTCCAGCAGTCCTCTGTCCAAGAGCTCTATAGTGGGGGGTCAGGATGCAAAGGAGGGACAGTGGCCCTGGCAGGCCTATCTCCAGATCATGTGGAAGGATAACCCTGGATACGCTACCATCTGTGGAGGCTCCCTGATCAGTCAGCACTGGGTTCTCACTGCAGCGCACTGCTTTGACATACCCTATGTCTTTGAGAAATCGCATGTGCTCCTGGGAGTGTACAGGctaacacaacacaactcacATGTAAAAAGGCTTGCCTTAAAGAGGGAGCCCATCATACACAAGAGCTACATGGTAAACCAATACCAGGAAGGCCGTGACATCGCCCTGGTAGAGCTCAGCGGGTCAGTGTCCTACAGTCAGTACATCAGTCCTGTAACTCTGGCTGAGGCTAATGCTGACGACTTCACCTGGGGCTGGGAGTGCTGGGCGACCGGCTGGGGGACAATTGGAAAGGATGtgcctCTACCAGACCCTAAAACCCTGCAGGAGGTTAAACTGCCAATCgGTGACTCTGGGGGTCCTCTGGTCTGTAAGAATAAAAAGTTGTCCTGGGTCCAGGCTGGGATCACCAGTTTTGGGAAAAACTCTACATCACCCAACGCTCCAGGGGTCTTCACCCGGGTCTCTAGCTTCCGCCACTGGATAAAGCAGCACAGTGTGTCCAGCAGTCCTCAGTTCAGGAGCTCCATCGTGGGGGGACATGATGCGATGGAGGGACAGTGGCCCTGGATGGCCTATCTCAAGATCTTTTCTAAAAAAGCAGATCATTCTGAATGGTTCACTGAGTGTGGCGGCTCCCTGATCAGCGCCCAGTGGGTTCTCACTGCAGCGCACTGCTTTGACGGGTCTCTCAATCAGGACAAATCCAGGGTGCTCCTGGGGGAGATCAGTGTGACCAACAACCATCACAAAATGATCAAGATACAGAAAGTCATCAAGCATGAGAAGTTCCACCACTACTCCTCAGGAAATGACATCGCCTTGGTGCTGCTGAGTGAAAAACAGTCCTCAAATGCAGTCAATGTATCCCAGGAGAATGAGGATTTCTCCAATAACGGGGAGTGCTGGATCACCGGCTGGGGGAGGACGTTAGGCAAACAACCTCTCCCAGAAATCCTTCAGCAAGCCGAAGTTCCTGTTTTGACGGCTGATCAGTGCAAGATAGCCTGGGACTCGATGCCAGCTCACACACTCTGCGCTGGGAATACGACAAGAGGCGCCTGTGAAgGGGATAGTGGAGGTCCTCTGGTCTGTAAGGTGAATGACCGTTGGGTCCAGGCTGGTATCGTGAGTTACGGGCCTAAAGACTGCAACCCCCCCTTGAAGCCCACAGTGTTCACTCGGGTCTCCAGCTTCCTGCACTGGATAAATAATCACACCAACATGCCCGATTTCCACTGAGCTGTGCAGACAGCACCCTCTCCTGGCTCCCAAGctcaagagacagagagagagtgaagacAGGAACACCATGTCATTATATTAGCAAACCAACATATACACTTGATGTGTCATCGGCTATTGCTTCTCCAGTTTCCCCTTAATGTAAGGAGGGCACAAATTAGAGAAAATGTGCCTGAGTTgttttctctcgctctctctaaATTCAGtgctatatttttttacagctttAATCTGTGTTCATTCCTGAGGGctgccctgctctctcctctcccactgTGATATCGGCTGCTGCTCTTGGCTCTGCTCTGCTGTGAGAGATCAGTAGACTCTGATGAACTGCAATAAACCTGCAATGCATTCAAACTCCTGGTCTGGGGctgcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012143 True 1827 mRNA 0.52 9 11657389 11671798

Neighbor

gene id symbol gene type direction distance location
AMCG00012144 NA coding upstream 31702 11619304 ~ 11625687 (+)
AMCG00012145 NA coding upstream 123593 11526885 ~ 11533796 (+)
AMCG00012146 NA coding upstream 147867 11493717 ~ 11509522 (+)
AMCG00012147 NA coding upstream 179267 11477892 ~ 11478122 (+)
AMCG00012142 NA coding upstream 187984 11465808 ~ 11469405 (+)
AMCG00012148 NA coding downstream 8512 11680310 ~ 11682928 (+)
AMCG00012153 NA coding downstream 18925 11690723 ~ 11700382 (+)
AMCG00012150 NA coding downstream 47542 11719340 ~ 11725106 (+)
AMCG00012151 NA coding downstream 66379 11738177 ~ 11750624 (+)
AMCG00012155 NA coding downstream 126779 11798577 ~ 11803125 (+)
G134749 NA non-coding upstream 152741 11503960 ~ 11504648 (+)
G134698 NA non-coding upstream 355324 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 423506 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 674595 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 804098 10849858 ~ 10853291 (+)
G134766 NA non-coding downstream 39452 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 147459 11819257 ~ 11844832 (+)
G134877 NA non-coding downstream 244546 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 252470 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 447433 12119231 ~ 12119660 (+)
G134743 NA other upstream 211226 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 363490 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 596359 11049065 ~ 11061030 (+)
G134613 NA other upstream 722282 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 973292 10629684 ~ 10684097 (+)
G134898 NA other downstream 359099 12030897 ~ 12031490 (+)
G134955 NA other downstream 500740 12172538 ~ 12172802 (+)
G134958 NA other downstream 509263 12181061 ~ 12181320 (+)
G134968 NA other downstream 519757 12191555 ~ 12192408 (+)
G135026 NA other downstream 894414 12566212 ~ 12716115 (+)

Expression


Co-expression Network