AMCG00012153


Basic Information

Item Value
gene id AMCG00012153
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11690723 ~ 11700382 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012153
ATGcttctcctgcagctgctgttctCTGTGCTGCTCCTGAACACTCCTGAAGTGTCCAGCAGTCCTCAGTTCAGGAGCTCCATCGTGGGGGGACATGATGCGACGGAGGGACAGTGGCCCTGGATGGCCTATCTCAAGATCTTTTTGAAAAAAGCAGATCATTCTGAATGGTTCACTGAGTGTGGCGGCTCCCTGATCAGCGCCCAGTGGGTTCTCACTGCAGCGCACTGCTTTGACGGAACTTTCAATCAGGAAAAATCCAGGGTGCTCCTGGGGGAGATCAGCGTGACcgacaaccaaaacaaaatgatcaAGATACAGAAAGTCATCAAGCATGAGAAGTACCATAACTACGCCTCAGGAAATGATATCGCCTTGGTGCTGCTGAGTGAAAAACAGTCCTCGAATGCAGTGATCAGACCAGTCGATCTGTCCCGGGGGAATGAGGATTTCTCCAATAACGAGGAGTGCTGGATCACCGGCTGGGGGTTAACAAAAGACAATAGTAAGTGGCCACAAAAGCAGGAggGGATAGTGGAGGTCCTCTGGTCTGTGAATGACCTCTGGGTCCAGGCTGGTATCGTGAGTTACGGGTATAATCACTGCAAACCCCCCTTGAAGCCCACAGTGTTCACTCAGGTCTCCAGCTTCCTGCCCTGGATAAAGAAGCATGCAGCACCCTCTCCTGGCTCCCAAGctcaagagacagagagagagtga

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012153 True 720 mRNA 0.52 5 11690723 11700382

Neighbor

gene id symbol gene type direction distance location
AMCG00012148 NA coding upstream 7795 11680310 ~ 11682928 (+)
AMCG00012143 NA coding upstream 18925 11657389 ~ 11671798 (+)
AMCG00012144 NA coding upstream 65036 11619304 ~ 11625687 (+)
AMCG00012145 NA coding upstream 156927 11526885 ~ 11533796 (+)
AMCG00012146 NA coding upstream 181201 11493717 ~ 11509522 (+)
AMCG00012150 NA coding downstream 18958 11719340 ~ 11725106 (+)
AMCG00012151 NA coding downstream 37795 11738177 ~ 11750624 (+)
AMCG00012155 NA coding downstream 98195 11798577 ~ 11803125 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding downstream 201165 11901547 ~ 11913954 (+)
AMCG00012162 NA coding downstream 291133 11991515 ~ 12028909 (+)
G134749 NA non-coding upstream 186075 11503960 ~ 11504648 (+)
G134698 NA non-coding upstream 388658 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 456840 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 707929 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 837432 10849858 ~ 10853291 (+)
G134766 NA non-coding downstream 10868 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 118875 11819257 ~ 11844832 (+)
G134877 NA non-coding downstream 215962 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 223886 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 418849 12119231 ~ 12119660 (+)
G134743 NA other upstream 244560 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 396824 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 629693 11049065 ~ 11061030 (+)
G134613 NA other upstream 755616 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 1006626 10629684 ~ 10684097 (+)
G134898 NA other downstream 330515 12030897 ~ 12031490 (+)
G134955 NA other downstream 472156 12172538 ~ 12172802 (+)
G134958 NA other downstream 480679 12181061 ~ 12181320 (+)
G134968 NA other downstream 491173 12191555 ~ 12192408 (+)
G135026 NA other downstream 865830 12566212 ~ 12716115 (+)

Expression


Co-expression Network