G136538


Basic Information

Item Value
gene id G136538
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17488350 ~ 17488827 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU171617
gaggaggccaGAGGGGTTGTGGGGCTGATGCTGAAGGACACCCACCCCCAGTCCCCCTTCTTCTGGGCCATTCCCCTCTCACAGgaGCGCCATGAGCAGATGCTGCAGTTGTTCTCATGTCTGGCGGAGGTGGAGGGCCTACAGCTGCCCCTGCCCCCTTGGGAGGCCCAGCCAGGGTGCAGGGTGCTGGGGGAGCTGCAGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171617 True 205 lncRNA 0.66 2 17488350 17488827

Neighbor

gene id symbol gene type direction distance location
AMCG00012386 NA coding upstream 108229 17374960 ~ 17380121 (+)
AMCG00012388 krtcap2 coding upstream 116797 17369263 ~ 17371553 (+)
AMCG00012389 LOC107549236 coding upstream 198455 17269066 ~ 17289895 (+)
AMCG00012377 NA coding upstream 229751 17255412 ~ 17258599 (+)
AMCG00012379 NA coding upstream 245521 17238280 ~ 17242829 (+)
AMCG00012395 chrnb2,chrnb2b,LOC106575520,LOC104959165 coding downstream 8627 17497454 ~ 17504572 (+)
AMCG00012396 ilf2,LOC106588321,LOC106569884 coding downstream 40946 17529773 ~ 17537629 (+)
AMCG00012397 NA coding downstream 63759 17552586 ~ 17578771 (+)
AMCG00012406 ints3,LOC106588323 coding downstream 92549 17581376 ~ 17598072 (+)
AMCG00012404 syt11 coding downstream 116906 17605733 ~ 17609903 (+)
G136490 NA non-coding upstream 25665 17419215 ~ 17462685 (+)
G136486 NA non-coding upstream 85990 17402019 ~ 17402360 (+)
G136458 NA non-coding upstream 147614 17339578 ~ 17340736 (+)
G136457 NA non-coding upstream 155780 17330794 ~ 17332570 (+)
G136444 NA non-coding upstream 183351 17300527 ~ 17304999 (+)
G136539 NA non-coding downstream 492 17489319 ~ 17489544 (+)
G136564 NA non-coding downstream 134286 17623113 ~ 17635961 (+)
G136568 NA non-coding downstream 159801 17648628 ~ 17649107 (+)
G136571 NA non-coding downstream 174606 17663433 ~ 17664170 (+)
G136718 NA non-coding downstream 412081 17900908 ~ 17901656 (+)
G136489 NA other upstream 12253 17411761 ~ 17476097 (+)
G136499 NA other upstream 22291 17459484 ~ 17466059 (+)
AMCG00012387 NA other upstream 99551 17384936 ~ 17388799 (+)
G136341 NA other upstream 223946 17127155 ~ 17264404 (+)
AMCG00012374 NA other upstream 359011 17126013 ~ 17129339 (+)
AMCG00012401 adar other downstream 20545 17509372 ~ 17522821 (+)
G136558 NA other downstream 58541 17547368 ~ 17547968 (+)
G136566 NA other downstream 156814 17645641 ~ 17646905 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other downstream 160438 17649265 ~ 17653462 (+)
AMCG00012417 NA other downstream 266593 17755420 ~ 17760282 (+)

Expression


Co-expression Network