Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012396 |
| gene name | ilf2,LOC106588321,LOC106569884 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17529773 ~ 17537629 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| ilf2 | Predicted to enable DNA binding activity and double-stranded RNA binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to be located in nucleolus. Is expressed in female organism. Orthologous to human ILF2 (interleukin enhancer binding factor 2). |
| description |
|---|
| PREDICTED: interleukin enhancer-binding factor 2 homolog |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K13089 | ILF2; interleukin enhancer-binding factor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012396 | True | 1032 | mRNA | 0.63 | 13 | 17529773 | 17537629 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012395 | chrnb2,chrnb2b,LOC106575520,LOC104959165 | coding | upstream | 25201 | 17497454 ~ 17504572 (+) |
| AMCG00012386 | NA | coding | upstream | 149652 | 17374960 ~ 17380121 (+) |
| AMCG00012388 | krtcap2 | coding | upstream | 158220 | 17369263 ~ 17371553 (+) |
| AMCG00012389 | LOC107549236 | coding | upstream | 239878 | 17269066 ~ 17289895 (+) |
| AMCG00012377 | NA | coding | upstream | 271174 | 17255412 ~ 17258599 (+) |
| AMCG00012397 | NA | coding | downstream | 14957 | 17552586 ~ 17578771 (+) |
| AMCG00012406 | ints3,LOC106588323 | coding | downstream | 43747 | 17581376 ~ 17598072 (+) |
| AMCG00012404 | syt11 | coding | downstream | 68104 | 17605733 ~ 17609903 (+) |
| AMCG00012407 | rit1,LOC107672884 | coding | downstream | 76865 | 17614494 ~ 17621187 (+) |
| AMCG00012405 | NA | coding | downstream | 119829 | 17657458 ~ 17662757 (+) |
| G136539 | NA | non-coding | upstream | 40229 | 17489319 ~ 17489544 (+) |
| G136538 | NA | non-coding | upstream | 40946 | 17488350 ~ 17488827 (+) |
| G136490 | NA | non-coding | upstream | 67088 | 17419215 ~ 17462685 (+) |
| G136486 | NA | non-coding | upstream | 127413 | 17402019 ~ 17402360 (+) |
| G136458 | NA | non-coding | upstream | 189037 | 17339578 ~ 17340736 (+) |
| G136564 | NA | non-coding | downstream | 85484 | 17623113 ~ 17635961 (+) |
| G136568 | NA | non-coding | downstream | 110999 | 17648628 ~ 17649107 (+) |
| G136571 | NA | non-coding | downstream | 125804 | 17663433 ~ 17664170 (+) |
| G136718 | NA | non-coding | downstream | 363279 | 17900908 ~ 17901656 (+) |
| G136842 | NA | non-coding | downstream | 724268 | 18261897 ~ 18269507 (+) |
| AMCG00012401 | adar | other | upstream | 6952 | 17509372 ~ 17522821 (+) |
| G136489 | NA | other | upstream | 53676 | 17411761 ~ 17476097 (+) |
| G136499 | NA | other | upstream | 63714 | 17459484 ~ 17466059 (+) |
| AMCG00012387 | NA | other | upstream | 140974 | 17384936 ~ 17388799 (+) |
| G136341 | NA | other | upstream | 265369 | 17127155 ~ 17264404 (+) |
| G136558 | NA | other | downstream | 9739 | 17547368 ~ 17547968 (+) |
| G136566 | NA | other | downstream | 108012 | 17645641 ~ 17646905 (+) |
| G136569 | cks1b,LOC103032043,LOC108433716,LOC103358762 | other | downstream | 111636 | 17649265 ~ 17653462 (+) |
| AMCG00012417 | NA | other | downstream | 217791 | 17755420 ~ 17760282 (+) |
| G136641 | NA | other | downstream | 226516 | 17764145 ~ 17767531 (+) |
