Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012695 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 4650298 ~ 4653916 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0044427 | obsolete chromosomal part | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012695 | True | 447 | mRNA | 0.50 | 4 | 4650298 | 4653916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012697 | NA | coding | upstream | 27062 | 4621520 ~ 4623236 (+) |
| AMCG00012706 | NA | coding | upstream | 50266 | 4594092 ~ 4600032 (+) |
| AMCG00012700 | pah,LOC107744915,LOC107695873 | coding | upstream | 73114 | 4539024 ~ 4577184 (+) |
| AMCG00012685 | scyl2,LOC106576457,LOC107597030 | coding | upstream | 301542 | 4329671 ~ 4348756 (+) |
| AMCG00012686 | NA | coding | upstream | 321144 | 4320973 ~ 4329154 (+) |
| AMCG00012699 | NA | coding | downstream | 16643 | 4670559 ~ 4675212 (+) |
| AMCG00012703 | NA | coding | downstream | 23702 | 4677618 ~ 4685424 (+) |
| AMCG00012698 | gnptab,LOC107593561,LOC107735372,LOC107590211 | coding | downstream | 67343 | 4721259 ~ 4748304 (+) |
| AMCG00012701 | NA | coding | downstream | 103325 | 4757241 ~ 4761029 (+) |
| AMCG00012696 | arl1 | coding | downstream | 206810 | 4860726 ~ 4865767 (+) |
| G38964 | NA | non-coding | upstream | 132667 | 4517136 ~ 4517631 (+) |
| G38886 | NA | non-coding | upstream | 673681 | 3974365 ~ 3976617 (+) |
| G38882 | NA | non-coding | upstream | 687725 | 3962363 ~ 3962573 (+) |
| G38845 | LOC103376870 | non-coding | upstream | 767880 | 3795081 ~ 3882418 (+) |
| G38843 | NA | non-coding | upstream | 856524 | 3791476 ~ 3793774 (+) |
| G39186 | NA | non-coding | downstream | 295324 | 4949240 ~ 4955867 (+) |
| G39193 | NA | non-coding | downstream | 383631 | 5037547 ~ 5074126 (+) |
| G39279 | NA | non-coding | downstream | 782917 | 5436833 ~ 5437162 (+) |
| G39321 | LOC100846954 | non-coding | downstream | 993858 | 5647774 ~ 5648107 (+) |
| G39382 | NA | non-coding | downstream | 1268698 | 5922614 ~ 5923023 (+) |
| G38954 | NA | other | upstream | 276724 | 4370313 ~ 4373574 (+) |
| AMCG00012681 | NA | other | upstream | 398704 | 4183875 ~ 4251594 (+) |
| AMCG00012641 | NA | other | upstream | 3068910 | 1394839 ~ 1581388 (+) |
| AMCG00012639 | LOC105896728,LOC103361979,LOC104943185,LOC102310764,LOC102198406,LOC100699467,LOC101465237 | other | upstream | 3811032 | 778908 ~ 839266 (+) |
| G39297 | NA | other | downstream | 898501 | 5552417 ~ 5552767 (+) |
| AMCG00012718 | NA | other | downstream | 1153930 | 5807846 ~ 5823515 (+) |
| AMCG00012734 | NA | other | downstream | 1399232 | 6053148 ~ 6056832 (+) |
| AMCG00012748 | itpr2,LOC100196824 | other | downstream | 1822333 | 6476249 ~ 6517983 (+) |
| AMCG00012763 | NA | other | downstream | 2690534 | 7344450 ~ 7381559 (+) |
