Gene
RNA
| Item | Value |
|---|---|
| gene id | G46476 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 41053148 ~ 41061824 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57934 | True | 1147 | lncRNA | 0.40 | 3 | 41053148 | 41061824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013742 | NA | coding | downstream | 57740 | 40992789 ~ 40995408 (-) |
| AMCG00013738 | NA | coding | downstream | 125959 | 40889729 ~ 40927189 (-) |
| AMCG00013737 | NA | coding | downstream | 164697 | 40884954 ~ 40888451 (-) |
| AMCG00013733 | NA | coding | downstream | 406000 | 40641076 ~ 40647148 (-) |
| AMCG00013723 | NA | coding | downstream | 1147480 | 39900104 ~ 39905668 (-) |
| AMCG00013747 | NA | coding | upstream | 141240 | 41203064 ~ 41222134 (-) |
| AMCG00013748 | NA | coding | upstream | 161067 | 41222891 ~ 41227102 (-) |
| AMCG00013749 | NA | coding | upstream | 174482 | 41236306 ~ 41279477 (-) |
| AMCG00013750 | NA | coding | upstream | 235736 | 41297560 ~ 41360478 (-) |
| AMCG00013751 | NA | coding | upstream | 451780 | 41513604 ~ 41536486 (-) |
| G46459 | NA | non-coding | downstream | 66874 | 40983633 ~ 40986274 (-) |
| G46458 | NA | non-coding | downstream | 69591 | 40983132 ~ 40983557 (-) |
| G46421 | NA | non-coding | downstream | 451616 | 40601198 ~ 40601532 (-) |
| G46420 | NA | non-coding | downstream | 455250 | 40597358 ~ 40597898 (-) |
| G46419 | NA | non-coding | downstream | 459728 | 40593148 ~ 40593420 (-) |
| G46484 | NA | non-coding | upstream | 37879 | 41099703 ~ 41103966 (-) |
| G46491 | NA | non-coding | upstream | 109901 | 41171725 ~ 41174790 (-) |
| G46547 | NA | non-coding | upstream | 360947 | 41422771 ~ 41426128 (-) |
| G46555 | NA | non-coding | upstream | 380110 | 41441934 ~ 41442165 (-) |
| G46565 | NA | non-coding | upstream | 405198 | 41467022 ~ 41477661 (-) |
| AMCG00013732 | NA | other | downstream | 415920 | 40618343 ~ 40637228 (-) |
| G46423 | NA | other | downstream | 444620 | 40603601 ~ 40608528 (-) |
| G46418 | NA | other | downstream | 465756 | 40586816 ~ 40587392 (-) |
| AMCG00013730 | NA | other | downstream | 624523 | 40386061 ~ 40428625 (-) |
| G46333 | NA | other | downstream | 778050 | 40273391 ~ 40275098 (-) |
| AMCG00013773 | NA | other | upstream | 1366953 | 42428777 ~ 42455758 (-) |
| G46742 | NA | other | upstream | 1637682 | 42699506 ~ 42701068 (-) |
| AMCG00013820 | tmem167b | other | upstream | 2547458 | 43609282 ~ 43614579 (-) |
| AMCG00013846 | NA | other | upstream | 4277035 | 45338859 ~ 45344015 (-) |
| G47261 | NA | other | upstream | 4561414 | 45623238 ~ 45623895 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_033221 | dre-let-7a-6 | non-coding | NC_007117.7 | CM002890.2 | 54506458 ~ 54506586 (-) |
| grasscarp (Ctenopharyngodon idella) | G21605 | NA | non-coding | CI01000002 | null | 960615 ~ 974163 (+) |
| grasscarp (Ctenopharyngodon idella) | G60426 | NA | non-coding | CI01000009 | null | 15288178 ~ 15288394 (-) |
| grasscarp (Ctenopharyngodon idella) | G134589 | NA | non-coding | CI01000026 | null | 12359897 ~ 12360270 (-) |
| mexican tetra (Astyanax mexicanus) | G17973 | LOC103044489,LOC108428292 | non-coding | NC_035899.1 | CM008302.1 | 11590304 ~ 11595495 (+) |
| mexican tetra (Astyanax mexicanus) | G113267 | NA | non-coding | NC_035909.1 | CM008312.1 | 23686273 ~ 23686831 (-) |
