XLOC_006131 (CABZ01087953.1)


Basic Information

Item Value
gene id XLOC_006131
gene name CABZ01087953.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 33688474 ~ 33695296 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012073
ATGGGTTTTCAGGACACTGTTTTGCAGACAATTGATAGCGtcaaATTTAGAGGGACACTTGACAACCTTGACCGGTCCAAACTACAGCTTCTGGCACTCTCTTCTGCTGGAGTTGGAGCACTTTTGTGCTATTTGTCATGGAGAAAAGGCCCCAAAACAATACCAATAGGAGATGGCTGGTGGGGAGCTGGACAGAAGTCTTTAACTGAGGACAAAACCATTCAAAGATTTGTTGTGAAGACCTCAGTGGAAGAGATAGAGGATCTGCACAAACGCATTGATCTAACACGTTTCACTGATCCACTGGAGGATAGCAAGTTTAATTATGGATTTAACTCGACTTACCTTAGGCGGGTAGTCTCTTATTGGAGGCACCAGTTCAACTGGGAGAAGCAGGTGAAGGTGATTAACCAGTATCCTCACTTCAAAACCAAAATTGAAGGAATAGATGTGCATTTTGTGCATGTGAGGCCTCTTCAGAAGTCTGGCCAGACGGTTGTTCCTCTCATGATGGTTCACGGCTGGCCTGGTTCCTTCTATGAGTTTTACGGGATAATCCCCTTACTCACCAAGACCGATTCCAATGTGGTCTTTGAGGTCATCTGTCCCTCCATTCCAGGCTACGGCTACTCTGAAGCGCCACATAAAAAAGGT
>TCONS_00012074
TTAGAGGGACACTTGACAACCTTGACCGGTCCAAACTACAGCTTCTGGCACTCTCTTCTGCTGGAGTTGGAGCACTTTTGTGCTATTTGTCATGGAGAAAAGGCCCCAAAACAATACCAATAGGAGATGGCTGGTGGGGAGCTGGACAGAAGTCTTTAACTGAGGACAAAACCATTCAAAGATTTGTTGTGAAGACCTCAGTGGAAGAGATAGAGGATCTGCACAAACGCATTGATCTAACACGTTTCACTGATCCACTGGAGGATAGCAAGTTTAATTATGGATTTAACTCGACTTACCTTAGGCGGGTAGTCTCTTATTGGAGGCACCAGTTCAACTGGGAGAAGCAGGTGAAGGTGATTAACCAGTATCCTCACTTCAAAACCAAAATTGAAGGAATAGATGTGCATTTTGTGCATGTGAGGCCTCTTCAGAAGTCTGGCCAGACGGTTGTTCCTCTCATGATGGTTCACGGCTGGCCTGGTTCCTTCTATGAGTTTTACGGGATAATCCCCTTACTCACCAAGACCGATTCCAATGTGGTCTTTGAGGTCATCTGTCCCTCCATTCCAGGCTACGGCTACTCTGAAGCGCCACATAAAAAAGGATTTAACACCATGGAGGCTGCCCGCATCTTCCTTAAGCTGATGGAAAGACTTGGGTTCAGTGAGTTTTACGTGCAGGGAGGAGACTGGGGTGCCTTTATTACCAGCAACATGGCCCAGATGAAACCAGATTGTGTTCGTGGCCTGCACTTGAACATGGTCATTGCCAGGACAGACAGCACTGCACAGCTCCTCTCCTTGGTCATCGGTCGCTACTTGCCATTCTTGGTGGGCTTCACAAAGGAGGATGTCAGACGACTTTATCCATACATGGAGAAGAATATATATGACATTCTGAGAGAAACCGGCTATTTACACATTCAAGCCACTAAACCAGACACAGCAGGATGTGGACTGAATGACTCTCCAGTCGGATTGGCTGCCTATATCTTGGAGAAGTTCTCCACCTGGACAAACTTGGAAAATAGAGACCTAGAGGATGGAGGTTTAGAGAGAAAGTTCAAccttgatgacctgcttacaaaCGTCATGATCTACTGGACCACGTGCTCTATCATTCCCTCAATGCGCTTCTACAAAGAGAACCTGAAGAAAGACTTCAAGACAAGGGTGGACAGAGTGACAAGTATCCATGTGCCGACTGGCCTGGCTGCCTTTCCTGATGAGCTACTCCACTGTCCTCGAGCCTGGGCCAGCTCACGCTTTTCAGATGTGCGTTCCTTCACCTACATGCCCCGAGGAGGACACTTTGCTGCCTTTGAGGAACCCCAACTCCTGGCTCAAGACATCATCCAGTTTGCTGAGAAAGTGGAGGGCAAAAGCCACAAGTAACAGCTTTATTTTAGCATCATAAGAAAACTAATGCACTGCTCTGTTCAAATATGGAAGTATTAGTAAACAGTTTAACTACAATGTTTTTCAATGAACCAAATGAAGTTAAAGAATTTCTgaagttttgttattattttgcatgATGCTTTGTAAGTAAAACATGTTATGCTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1050 Predicted to enable epoxide hydrolase activity. Predicted to be involved in arachidonic acid metabolic process and epoxide metabolic process. Predicted to act upstream of or within response to toxic substance.

Ensembl:

ensembl_id ENSDARG00000103298 ENSDARG00000104106

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012073 False 654 mRNA 0.46 4 33688474 33690680
TCONS_00012074 True 1568 mRNA 0.46 8 33689740 33695296

Neighbor

gene id symbol gene type direction distance location
XLOC_006130 mgme1 coding upstream 29589 33655404 ~ 33658885 (+)
XLOC_006128 cfl1l coding upstream 79047 33606739 ~ 33609427 (+)
XLOC_006127 jag2a coding upstream 136775 33488032 ~ 33551699 (+)
XLOC_006126 ftr81 coding upstream 219777 33462232 ~ 33468697 (+)
XLOC_006125 ftr80 coding upstream 229684 33452096 ~ 33458790 (+)
XLOC_006132 macrod2 coding downstream 8488 33703784 ~ 34558921 (+)
XLOC_006133 CR524481.1 coding downstream 730952 34426248 ~ 34426365 (+)
XLOC_006134 tasp1 coding downstream 994367 34689663 ~ 34750299 (+)
XLOC_006135 NA coding downstream 1056878 34752174 ~ 34984913 (+)
XLOC_006136 CR376850.1 coding downstream 1187950 34883246 ~ 34883370 (+)
XLOC_006116 NA non-coding upstream 583246 33104911 ~ 33105228 (+)
XLOC_006113 BX470227.1 non-coding upstream 703705 32984654 ~ 32984769 (+)
XLOC_006112 NA non-coding upstream 771548 32906643 ~ 32916926 (+)
XLOC_006111 CR936241.1 non-coding upstream 841865 32846493 ~ 32846609 (+)
XLOC_006105 CR769766.1 non-coding upstream 1295975 32392383 ~ 32392499 (+)
XLOC_006137 CR376850.2 non-coding downstream 1274223 34969519 ~ 34969645 (+)
XLOC_006140 CU681845.1 non-coding downstream 1788322 35483618 ~ 35522176 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_07092852_07097731 EPHX5 coding CI01000012 null 7092852 ~ 7097731 (-)