XLOC_006126 (ftr81)


Basic Information

Item Value
gene id XLOC_006126
gene name ftr81
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 33462232 ~ 33468697 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012068
ATCAGTATGGGAAATGCGACTTGATCATTGGGGAAACCATACTGTGCGTAAACTGTGTCGTTTTGTTGAAACTTTCAAATGATTTGGCGCTTCTTTTTAGTCGGATAGAAGTATTGCCCAGTCCGACGTGTAGTGAGGAGACACGAATTGAAGTTGAGTGGAACTAAAGTTTAACCTAAAGTTTTTGACTAGCTGCAAAATGGCAGAATCATTGGATGATCAAAATTTCTTTAACTGTCCAATTTGTCTACATATTCTGAAGAACCCAGTCACTACGTCTTGTGGTCACAGTTTCTGTATGGACTGTCTTAATGAATTCTGGGATCAGGAAATTCTGAAGGGCATTTACAGCTGTCCCCAGTGCAGGCATTCATTCACCCCAAGACCAGCTCTCTGCAAAAATACTGTTATTGCTGAAGTTGTGGAGAGAATGAAGATTAAAGAAACAGCAACGGTCTCTCCTGTTTTAAGTTTTGCTGTGTCTGGGGATGTGGAGTGTGATATCTGCACTGAGACCAAACTAAAAGCCATTAAATCTTGCCTGACATGTTTGGCTTCTTACTGTGAATCTCACATCCAAAGTCATTATACATCTCCTGCGTTAAAGTGGCACAAATTGGCCAATGCCTCACCACGTCTACTGGACCAGATCTGCTCTCAACATCATAAGCCTCTGGAGCTGTACTGTTGTAAAGATCAGCAGCTGATATGTATGCAGTGTGCTCTGATTAACCACCCGAACCACAGTATGACTTCACCTGCGGCTGAACGACAAAACGTCCAGGTACGGTTGAAGAAAAGTCAGGTTGGAATACAATTGGAAATACTTCAGCGTGAGATGAAGGTGCAGGAATTAAAACAGGCTATGGCCTCCCATAAGCGCTCTGCAGAGGCAGCAGTGATTCACTGTGAGCAGGTTTTCGCAGCTCTAATCAGCTCCTTGGAAAAAAAACGAGCTGAGATAACAAAGATGATCAGAGCTCAGGAGAAAGCTGAAGTGAGTGAAGTTGAAGTACATGTCAAAACACTGGAGCAGGAGATCAGTTACTTGAAGAAGAGGCATGAAGACCTGGAGAAGCTTTCAAAGGTCGACGATGACATCCATGTCATTAAGAATTTCCTCTTTCTTTCCCATTACTGGTGTTCAGACATGTCCAAGATGTCTGTCAGGCAGCTTCTGACATTTGAGGAAATAAGAAAAATTATCAGTGAGATGAAAATCCAACTGGACATCCTCTGTAAAGAAGACTTTGTCAGGATATCAGAGAAAGTTCCCACAGTCCATGTAATGGTGAATAATAAAAAGACCAAAGAGTATTTTCCATCTCAACCCAAGACCAGAGAAGAGTTCCTGATATATTCTTCTGATCTGAATCTGAATAACTCGTCAGTCTCTGGTAGCCTTACTGTGAAAAACGACAAGTTTGTGACACGGTGCAATGGTGGTTATGGGTATGGGTGTGGGAGTGACCAGGTGTCATGTAAAGAGCAACTGTCTGGACGCTGTTATTTTGAAGTTCAGTTGGCAGGAAAGGGTTGTTCTATTGCATTTTCATATTGCCAGAGTCAAAGAGAAACTTTTGGCTTTAACAACATGTCCTGGAAATGTGACTTTCCAGCAGCTAGTCTTTGTGTATGGCACAATTACAAACAGACAAACATTTCCTTTGTCTCCAAAATTGGAGTGTTTCTGGATCAAGCAGCAGGAACTGTGTCCTTTTACAATGTCTCTGATAAAATGACCCTCCTGCACAAAATCCAGACCACATTTACTAAGCCCCTCTATGCTGGGTTTTCACTTAAGGATTGGGGAAATGACTCCTCAGTGACCATTTGCGATCTTTCAGTGAATAAGTAGTCAGTGATGGTAAGCAAATGAATAGTAAATACAACATATAGCAAAAAAatccttaaagggttagttcacccaaaaatttaaattctgttacAATTTACTTTTCCTTTAATTGATCCACACATGTTTGAGTTTCTCCTGTTAAACACAATAgaatatattctgaagaaagctggaaacctgtaactactgactCCCATAGAAGTATGGTcataggttttcagcttttttttaaatatcttctgaACAGATTGAATAAACTCCTAAAGGTTTCGAACCACTTAAGGgaaagagtaaatagtgagtcaattttcatttttgaatgaactatctaTCCTTAAAGTAAAGGGGTAGTTACTAACTAAGCTAAATAAGGTCTGTGGAAAACATATCTCGCCAGTATTGAATGATTTGTTCTACAACATAAACTATGCAGACTCGCATGCCAAATATTATTTAGTCTCCAATTAGAGAtatatgttttgtaaaataaactagCTTCAAATTTTACTTTGTTGATATGGGGTTTCTAACTTAGGATGTAGAGCAAATGGTTCAAGTATCATCTAGTTGTGATTGCCACAGATGTTATTCTACTCCTAAATTGTAGAGGTCCATAAAATCTTAAAAGAAAAATTGGCAAATGTTTTGACATCATCTCTATACTCAATCAAATTTAGTATGTGCTTTCACAAAGCTTGGCTGAAGTATAATCATGTAAATAAAAGTTTATGAAAGTTTGTAAGGGTTGGCCATACAGTATAATTTTCGTTTCATTTCTATTTTGAAGTTGGGGCTTTTTCTTCTGAAAGTGGCTGAAAGCTTTTTCTTCTGTGGCAAGCACTTTTGTCTTCTGGTGTGACTGAAACTTGACATCGTGTTGACTTCAGCCTGTTTCAGTGATGTCAAGTCGGTTGCCAAGTTTCAGTTACTTGGGTGTTTATGCTAAAATTTAATGCTTGTTTAACAGAATTCCTTGTGTTTAGACTGACATTTCATTGTATGTTAAATgtattatgattaataatttatttttttctgtaccaACTGACAAATTGTTTGTCTGCATTGAGACTGAATCATTAAAGAAATGTGAAGAT

Function

symbol description
ftr81 Predicted to enable zinc ion binding activity. Orthologous to human RNF135 (ring finger protein 135).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060810-168 Predicted to enable zinc ion binding activity. Orthologous to human RNF135 (ring finger protein 135).

Ensembl:

ensembl_id ENSDARG00000109055

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012068 True 2955 mRNA 0.38 8 33462232 33468697

Neighbor

gene id symbol gene type direction distance location
XLOC_006125 ftr80 coding upstream 3442 33452096 ~ 33458790 (+)
XLOC_006124 brf1a coding upstream 12593 33368140 ~ 33449639 (+)
XLOC_006123 dcdc2b coding upstream 147474 33304187 ~ 33314758 (+)
XLOC_006122 iqcc coding upstream 160246 33298338 ~ 33301986 (+)
XLOC_006121 ccdc28b coding upstream 168578 33282095 ~ 33293654 (+)
XLOC_006127 jag2a coding downstream 19335 33488032 ~ 33551699 (+)
XLOC_006128 cfl1l coding downstream 138042 33606739 ~ 33609427 (+)
XLOC_006129 BX005372.1 coding downstream 182719 33651416 ~ 33689992 (+)
XLOC_006130 mgme1 coding downstream 186707 33655404 ~ 33658885 (+)
XLOC_006131 CABZ01087953.1 coding downstream 219777 33688474 ~ 33695296 (+)
XLOC_006116 NA non-coding upstream 357004 33104911 ~ 33105228 (+)
XLOC_006113 BX470227.1 non-coding upstream 477463 32984654 ~ 32984769 (+)
XLOC_006112 NA non-coding upstream 545306 32906643 ~ 32916926 (+)
XLOC_006111 CR936241.1 non-coding upstream 615623 32846493 ~ 32846609 (+)
XLOC_006105 CR769766.1 non-coding upstream 1069733 32392383 ~ 32392499 (+)
XLOC_006133 CR524481.1 non-coding downstream 957551 34426248 ~ 34426365 (+)
XLOC_006135 NA non-coding downstream 1283477 34752174 ~ 34984913 (+)
XLOC_006136 CR376850.1 non-coding downstream 1414549 34883246 ~ 34883370 (+)
XLOC_006137 CR376850.2 non-coding downstream 1500822 34969519 ~ 34969645 (+)
XLOC_006140 CU681845.1 non-coding downstream 2014921 35483618 ~ 35522176 (+)

Expression


Co-expression Network