AMCG00015294


Basic Information

Item Value
gene id AMCG00015294
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7037847 ~ 7042992 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015294
CGGGAAGGAGGCAGAATATCAAATGGACGCTAGAGAGACTTCGGGTTTGGTCTACAACGACGTTTGAAAAGGACACATTCACTGTGAAACGGGTTTTAAGTCCAAACCTTTAATCAGTGTTTGCAGTTTGCAGCCAGCAGTtgatacttttttcttcttcttcgaGTATCTGGGGCTTGTTTATTTCTCCCTAAGCTAACTGTTGCTCAAGATGTGTTTCCCGGGGGTGCCTGTGCTTCGTGCTTTGACAGCCCTGCTCTTCGtaaGTCAGTGCTGGGGTGGCTGTGTGGAGGTGGACTCTATGACTGAGGCGGTGGTGGGACAGGGTTTTAAACTGGGCTGCATCTCTTGTaagaggaggggggaggtgCCTGCTGAGGCCCATGTGCAATGGTCCTACCAAGCAAAGGGGGAGACCGAATTCACCGAACTGTACCACTACGAGAACATGATGCCTTACAACATGCACGATCAGTTCAAAGACCGTCTGGCCTGGAATGGGAGCAAGAATACGGTGGACCTCCAAGACGGCTCCCTGTACATCCTCAATGTCAGCCTGAACGACAGCGGCGTCTACCTCTGTCAGTTCTATCGCACCCTGCTCATGTCCAACCACAAATACAACGTCAACGCCAGCAAGCTGATCGAGCTCACCGTGGTGGAAGATGCTAACCGGGAGCTGACATCCATCATCTCGGAGATCATGATGTATGTGACCATCGTGGGGCTGCAGCTCTGGATGATTGTCATCCTAATCTACTGTTACAAGAAAATTACATCCGCCGGGGAAGAAGCCACGAAAGACGGCGAACCCTTAGACGGCAAAGAAGACAACTGCACTGCTCTGCAGGTGGAGGAGTAGAAGGACTGGCTCTCTAGGAGGAGCATTTCCGTAATGGCCCCCTACAATGAAAGAGGTGGTAGGAGGTGGGGGATCTCTGATCACACTGGCTGACTGTCAACCTTGAAAGAAGAAATCTAAgtatcattgtttttttctctctcagaaaAGAATTCCAGAACACGTATGCTGCGATCCTGTGTTATATTTTGCAGTGTCTGTTTGgcaattatttaaagatacGTGCCTTTTCCCAATGGCCAAATGCTTTTCAAACCTTGCCAAGTGTGCACTACCTGTATGCTTGTATATGCAAACAACTTTCCTTTAaatttttctttttcgtttCCCTGTTATGGAACTCTCCTAGAATAAAATCTTGAAAATGTGTCACAAAACTGCCAGGCAGGTAGCTGGGGCTTTGTAAGTGATTGAGTTGGAGCCGCTCTAGGGCACTGATTTGAGTACTGCTTTTAAGAGGAATTTCTCTGAACTCTcaattgaaaaatgtttaactCTTAAATCACTCAATTAGCATTTGCTGCATACCGTCTATGGCAGTGCTTCCCAACCTTAGCCCTGGGGGTCTAATGTCCTATCAATCTTTGCCTTAAGAAGTAGAATCTGATTTAATTCAAGGGGAATGCACTGATTTGTACAAACTAAACTAATAAAGTGTGTTTGAAAAGAAA

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process
GO:0001518 voltage-gated sodium channel complex cellular_component
GO:0005248 voltage-gated sodium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015294 True 1533 mRNA 0.46 6 7037847 7042992

Neighbor

gene id symbol gene type direction distance location
AMCG00015295 NA coding downstream 7654 7016116 ~ 7030193 (-)
AMCG00015286 NA coding downstream 69103 6953319 ~ 6968744 (-)
AMCG00015287 NA coding downstream 152393 6884044 ~ 6885454 (-)
AMCG00015282 NA coding downstream 183286 6835203 ~ 6854561 (-)
AMCG00015279 arhgap30,LOC106605587 coding downstream 272593 6731492 ~ 6765254 (-)
AMCG00015296 NA coding upstream 42704 7085696 ~ 7100008 (-)
AMCG00015301 NA coding upstream 84313 7127305 ~ 7213377 (-)
AMCG00015299 psmc4,prs6b,LOC107719110,LOC106605234 coding upstream 174284 7217276 ~ 7223945 (-)
AMCG00015300 NA coding upstream 188450 7231442 ~ 7231936 (-)
AMCG00015303 NA coding upstream 251870 7294862 ~ 7297585 (-)
G96696 NA non-coding downstream 675438 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 809071 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 814218 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 916845 6120654 ~ 6121002 (-)
G96642 NA non-coding downstream 918194 6118621 ~ 6119653 (-)
G96967 NA non-coding upstream 229919 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 293023 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 307517 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 319393 7362385 ~ 7364999 (-)
G97041 NA non-coding upstream 454950 7497942 ~ 7619517 (-)
AMCG00015288 NA other downstream 114133 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 141420 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 160113 6870462 ~ 6877734 (-)
G96766 NA other downstream 337490 6698857 ~ 6700357 (-)
AMCG00015271 NA other downstream 618366 6410647 ~ 6419481 (-)
AMCG00015305 NA other upstream 347897 7390889 ~ 7448294 (-)
G97125 NA other upstream 743095 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 1027043 8070035 ~ 8091826 (-)
G97411 NA other upstream 1088315 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 1180207 8223199 ~ 8283629 (-)

Expression


Co-expression Network