AMCG00015296


Basic Information

Item Value
gene id AMCG00015296
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7085696 ~ 7100008 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015296
ATGTATGCGGTGGTATTTGCTGGTGGTCTGGAGACATGGTTGTGTGGTTCCCTGGCCCTGTGGCAGGCTGTGATCACTGCCCACTGTGAGCCGGGCCTCTGTGCTAAGCTGGGGGAAGACGGtACGGCCAGTAACTCTCCTCGCAGCACCCCGAGCAGCTCTCCAGCAGTTCGACGGAGGCTCCTGGCAGCTGGTCTGTCTGCGCGCTCCTGCGAGGGAGACGGAGTGGGGGTGGCGGCCCAGGACCGGGGCTCTGACCCCAACCTGGCACCCTACCCCCAGGCAACCCCCAACTACCCCCTTCCCACATACAAGCAACGGAATGAGGACTTCAGGAAGATCTTCAAGAAGCTGCCCGACACAGAGCGTCTGATTGTGGATTACTCCTGCGCACTCCAGAAAGACATCCTCCTGCAGGGCAGACTGTACCTCTCGGAGAACTGGATCTGTTTCTATAGCAACATATTCCGCTGGGAGACTACAATCACTATTCAGCTGAAAGATGTGACCTCTCTGACTAAAGAGAAGACCGCCAAACTCATCCCCAATGCCATTCAGATCAGCACTGAACAAGACAAGCACTTTTTCACTTCGTTCGGAGCGCGAGACCGAAGCTACATGATGGTCTTCAGACTGTGGCAGAACGCGCTCATGGAGAAGcctctaTCCCCAAAGGAACTATGGCACATCGTACACCAGTGTTATGGCACAGAGCTGGGGCTGACCAGTGAGGACGACGACTACGTCTCTCCCACGGAGCACATCAATGGCCTCATCCCGGGAGAGGACGCTGTGTCGGAGCTGCTGGAGCTCAGCGCTGAGCCCCCCTCCAGGAACAGTGTGGACTTAAAGCTGGACCCCAGCCCCCTGAGCGACCGGCAGCCCAGCAACCGCTCACACACCTCTGTGGAGAGCAGTGATGGAGGGGCGCCCTCGttcctGGATGACATGGAGCCTCACTCTGACAGTCAGCTGGAGGGCTCCTCCAATCACACGCTGACGCCAGTCTCTGAGAGGGCCAAGGGGGGCATCGGCCTGGGAAACCTCTCCTCGTTGGACATCGCCAACGAcgacgacctgcccactgaccTCAGCAACTCCTCCGACACCCAGGAAGAGAGTGAAGTGGAGGCCTTTTGCGCCGACCTCAATGGCCGTCTGCACATCAACGCGGTGTACAGGATCGGCGTGGACAGGATGTACGAGCTTCTCTTCACCGACACCCACTTCATCCAGGACCTGTTTGAACAGCGCAGATTCACAGATCTGACCGTGAATGAGTGGAATACGGAGAACAGCGGGAACTCATCCAGAGTGCTGTCCTACACGATCGCCATTAACAACCCCCTGGGACCAAAGACTGCCCCTGTGGTGGAGACGCAGACTCTGTACAAGAGCAGTCAGAAGAGCGAGTGCTATGTGGTGGACTCCGAGGTCCTCACCCAGGGCATCCCCTACCAGGACTATTTCTACACCGTGCACCGCTACTACATCCGCTATCGAAAGCAGCCCTGGAGTTTAGTGAAGGCACTAATAGAGAAAAACACCTGGAGTGGCATTGAAGAGTACTACAGGCACCTAGAACTGGAGGTGTCTAAACTGGAGACGCTGCTGCAGACAGACGTGGTGGTCGGGGGGGACACTCCCAGCAAAGGTCCAGCGCTGCGCCGCCGGAAACGCAACTCTGGACGGCGGGTGGGGCACCACGAGGGCTTGGGGGTGGCTGGCACCCTCTCTGAAAAGGACCGGCCCTCCCGGGGTGGTACAGgTGCTCAGTTTCTGAAGTTGGGAGAGCGGTCACGAGGAGGAAACATCTCCACAATTCTGCTCATTGTCAGCTTCATTAGTAAGCTCCCTCAGACAGCCTCAGAGTGGGCTCAGATCCTGGAGCTGCAGAAGCAGTTCCACCAGGCCGAGGTGCACAAGTGGCAGCAGATCCTGAAGGCCTCAGTGGGACTCCTGGATGAGATGAAGCTGTCCCTGGAGAAGCTGCACAGAGGGATCGTCACCCCCAAGGGAGCGCAGGACCTCGCCGCCAGCACAGAGGACACCGCCACTCAGCAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015296 True 2067 mRNA 0.58 17 7085696 7100008

Neighbor

gene id symbol gene type direction distance location
AMCG00015294 NA coding downstream 42704 7037847 ~ 7042992 (-)
AMCG00015295 NA coding downstream 55503 7016116 ~ 7030193 (-)
AMCG00015286 NA coding downstream 116952 6953319 ~ 6968744 (-)
AMCG00015287 NA coding downstream 200242 6884044 ~ 6885454 (-)
AMCG00015282 NA coding downstream 231135 6835203 ~ 6854561 (-)
AMCG00015301 NA coding upstream 27297 7127305 ~ 7213377 (-)
AMCG00015299 psmc4,prs6b,LOC107719110,LOC106605234 coding upstream 117268 7217276 ~ 7223945 (-)
AMCG00015300 NA coding upstream 131434 7231442 ~ 7231936 (-)
AMCG00015303 NA coding upstream 194854 7294862 ~ 7297585 (-)
AMCG00015304 NA coding upstream 286851 7386859 ~ 7389560 (-)
G96873 NA non-coding downstream 21759 6987400 ~ 7063937 (-)
G96696 NA non-coding downstream 723287 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 856920 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 862067 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 964694 6120654 ~ 6121002 (-)
G96967 NA non-coding upstream 172903 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 236007 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 250501 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 262377 7362385 ~ 7364999 (-)
G97041 NA non-coding upstream 397934 7497942 ~ 7619517 (-)
AMCG00015288 NA other downstream 161982 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 189269 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 207962 6870462 ~ 6877734 (-)
G96766 NA other downstream 385339 6698857 ~ 6700357 (-)
AMCG00015271 NA other downstream 666215 6410647 ~ 6419481 (-)
AMCG00015305 NA other upstream 290881 7390889 ~ 7448294 (-)
G97125 NA other upstream 686079 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 970027 8070035 ~ 8091826 (-)
G97411 NA other upstream 1031299 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 1123191 8223199 ~ 8283629 (-)

Expression


Co-expression Network