AMCG00015305


Basic Information

Item Value
gene id AMCG00015305
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7390889 ~ 7448294 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015305
ATGCTCTGTTTCCCAGGAGGAACATCCCACTGTGCGCTCAAACCAAACCACATgctccaggctgctggcaaggcACAGTGTGGCAGCGCTTGTTTGCGTCCCTGCGCTCAACACTTCCACGGCAAGGAGTGGCTGTCGGGGTCAGGGATGAAACTGCTGAATCAGTCTGACTGGCTCCTTGTGGTGCTGGTGGTGCTGGGAttcctgctcttcctccttctGATTGGCATCTGCTGGTGCCAGTGCTGCCCACACACCTGCTGCTGCTACGTGCGCTGCCCCTGCTGCCCCGATCGCTGCTGCTGTCCCCAAGCACTGAGTGAGGTGAGCTCTCTGCATGAGGACCGGGACCCGCGGGGAATCCTACGAGAGGGAATGGGCCGCGTGCGCAACCAGGCCATGATGCCCATCATGGACGCCGACGAGCACATGAGCACCATCAGCAGCGTCTCGCAGCAAGGCCGCTACCGTGACGACGCCAGTAGCAGGGAGGGGGCCCGGGGAGGGGCCAGCCGTGGCCGAGCTCACTCCATGGACAACCTGGATGAACTGGGACGCACTTACTACGATGACTCTTACAGAGCAGGGGGGGGCAGAGGCCGCAGCTCTGATGACGAGTGGAGCGGGCGGGGCTATGACCGGGATGACCGCAGGAGAAGGGACTACTCCCCCGACAACCGGCGCAAAGACGCAGGGGTCTACAAGCGCTCCCATAGCCGTGACGACCTGATGGACCTGGAGCGGGGGCGAGGTCCCCCCCCACGCGGGGTGGGCTATGATGACAGCTTCCTAGAGGAGGCCCTGCGCAGGAAGCGGATGAACGAGCAGCAGCGAGTGGGCAGCAGGGAACGACTGGACAGCGACAGCGAGGCCCCGTCTTCACGCTCGGGCCGGGGGGGGGATCGCAGGGGTCCCGACCGCCGCAGATACAGCGACGACTACCTCCcgccgcccccaccccccccttaTAGCGACACCGAATCCAAGAAAAGCGACCTACGCaagAACGGCGCTGTGAGCAGGGAGAGCTTGGTGGATTACCTCCAAACTCAGGAGGCCTCGGGCGGGAGCCAGTGCCAGCACCAGCAGGACCAGCGCCAGCAACACGCCAGTCATGTTCACTCCGGTCCCGAGGTCAGCGCCCTGCGGAGCGGCTCGTTATAG
>TU120982
ccttttgtataattagtgtagtgctacatttagtcttgtttttgaataaatttgtcAATGTATATCTTTgaaattggtgtctgcgtccaattattacagaaattgagttctacaagattccaggattcgtgataagACTGGCTCCTTGTGGTGCTGGTGGTGCTGGGAttcctgctcttcctccttctGATTGGCATCTGCTGGTGCCAGTGCTGCCCACACACCTGCTGCTGCTACGTGCGCTGCCCCTGCTGCCCCGATCGCTGCTGCTGTCCCCAAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015305 True 1164 mRNA 0.64 9 7390889 7448294
TU120982 False 283 lncRNA 0.48 2 7408002 7408516

Neighbor

gene id symbol gene type direction distance location
AMCG00015304 NA coding downstream 1329 7386859 ~ 7389560 (-)
AMCG00015303 NA coding downstream 93304 7294862 ~ 7297585 (-)
AMCG00015300 NA coding downstream 158953 7231442 ~ 7231936 (-)
AMCG00015299 psmc4,prs6b,LOC107719110,LOC106605234 coding downstream 166944 7217276 ~ 7223945 (-)
AMCG00015301 NA coding downstream 177512 7127305 ~ 7213377 (-)
AMCG00015313 NA coding upstream 259616 7707910 ~ 7710268 (-)
AMCG00015314 NA coding upstream 300048 7748342 ~ 7757219 (-)
AMCG00015320 LOC107707189 coding upstream 372900 7821194 ~ 7825760 (-)
AMCG00015321 mrps12 coding upstream 378387 7826681 ~ 7828114 (-)
AMCG00015318 NA coding upstream 385024 7833318 ~ 7834220 (-)
G96994 NA non-coding downstream 25890 7362385 ~ 7364999 (-)
G96988 NA non-coding downstream 40104 7350509 ~ 7350785 (-)
G96984 NA non-coding downstream 53662 7336015 ~ 7337227 (-)
G96967 NA non-coding downstream 113516 7272911 ~ 7277373 (-)
G96873 NA non-coding downstream 326952 6987400 ~ 7063937 (-)
G97041 NA non-coding upstream 49648 7497942 ~ 7619517 (-)
G97121 NA non-coding upstream 332098 7780392 ~ 7780598 (-)
G97130 NA non-coding upstream 366600 7814894 ~ 7815402 (-)
G97134 NA non-coding upstream 371510 7819804 ~ 7820189 (-)
G97221 NA non-coding upstream 521303 7969597 ~ 7970757 (-)
AMCG00015288 NA other downstream 467175 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 494462 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 513155 6870462 ~ 6877734 (-)
G96766 NA other downstream 690532 6698857 ~ 6700357 (-)
AMCG00015271 NA other downstream 971408 6410647 ~ 6419481 (-)
G97125 NA other upstream 337793 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 621741 8070035 ~ 8091826 (-)
G97411 NA other upstream 683013 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 774905 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 913320 8361614 ~ 8370031 (-)

Expression


Co-expression Network