G97221


Basic Information

Item Value
gene id G97221
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7969597 ~ 7970757 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121210
TCCAATTAAGATTTTTGcatctttaatatatatatatacacacacacatgtacacacactttttttttttcctttcacaataaaactcatataaatgcatgaaactctgaggccccgactatgcaaaatgtaaaaaaagttcaaggaggtgtagactttctaggcactgtatgtatgtctgtccTCTGACATAGACACAAGTATACATAGACACTCAGACTCCATAtacttacacacagacacacacaatttgcacttatacatacacagtgcacacatgtatgtataagTGTAGTGTCTATGTATACAAGAACCACATACACTCTCCACTTAATCCGTCATGAGTAACAGACTCCACACTGCAGCTGCTgggaatattattttattgcttctACTTTACACCTCTGtattatagatttaaaattgaaatctgAGAGAAATAAACTACAGTGGGTGGGGGTCACACCTGCTCCCCAGGAAAGGATCTGTCTCATCAGTGTAACGGTTCTAGGAGACCAAGATCACAACAGTAGAGTACAAGAGTCCGTTCAGtatctggaataaactccccagcgatgtggttgaagctgaaaatttgggaacatttaaaaacagcctGGATAGGATCcgtggatcacttagttataatggcctcctctcgtttgtaaactttcttatgttcgtATGTCATTATTTAAAGCTGCCACTTGGGGGCAGCAAAACCATCAGACAAAAACAGAACTGTGATGAggtgaactttcttatgttcagtAAAATACAAGACTGTACAGTACCATAGAGTACAGAACAGATCAGATCTGTAAAGTACCatagagtacagtacagtgagtgCAAGATTATGGGAGCAGGGCTggactcctcctcctctcactctctttgGTATCTTCCAGGCTGCTCCATTGTGCGTGTGTGGAGAGGGGTCTACAGCAGGGAGGGGAGCGcaggtgtgtgcgtgtttgtgggGCGAGGGGGTGCTGGTTCTGGTTCAGTCCCGTTGGGCTCACAGCAGGTCAGGCCGGTGCCATCGGGCTCCACGCTGAGCTTCTTCACCACGCCGTCTTCCACCAGCATCACATACCTGCCAAACACACAATATGGACTCCATTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121210 True 1130 lncRNA 0.43 2 7969597 7970757

Neighbor

gene id symbol gene type direction distance location
AMCG00015331 NA coding downstream 7708 7958966 ~ 7961889 (-)
AMCG00015328 NA coding downstream 27613 7939137 ~ 7941984 (-)
AMCG00015330 mus81 coding downstream 47772 7915071 ~ 7921825 (-)
AMCG00015326 NA coding downstream 60671 7903578 ~ 7908926 (-)
AMCG00015327 NA coding downstream 72144 7888625 ~ 7897453 (-)
AMCG00015332 LOC107559259 coding upstream 1107 7971864 ~ 7994682 (-)
AMCG00015342 NA coding upstream 138716 8109473 ~ 8113457 (-)
AMCG00015337 NA coding upstream 144690 8115447 ~ 8121854 (-)
AMCG00015338 NA coding upstream 155756 8126513 ~ 8131083 (-)
AMCG00015336 NA coding upstream 163532 8134289 ~ 8143347 (-)
G97134 NA non-coding downstream 149408 7819804 ~ 7820189 (-)
G97130 NA non-coding downstream 154195 7814894 ~ 7815402 (-)
G97121 NA non-coding downstream 188999 7780392 ~ 7780598 (-)
G97041 NA non-coding downstream 350080 7497942 ~ 7619517 (-)
G96994 NA non-coding downstream 604598 7362385 ~ 7364999 (-)
G97244 NA non-coding upstream 30729 8001486 ~ 8016073 (-)
G97395 NA non-coding upstream 98023 8068780 ~ 8069037 (-)
G97409 gng3,LOC107559409 non-coding upstream 153511 8124268 ~ 8126464 (-)
G97475 NA non-coding upstream 461166 8431923 ~ 8433316 (-)
G97536 NA non-coding upstream 625978 8596735 ~ 8598299 (-)
G97125 NA other downstream 183155 7786087 ~ 7786442 (-)
AMCG00015305 NA other downstream 521303 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 1045883 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 1073170 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 1091863 6870462 ~ 6877734 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 99278 8070035 ~ 8091826 (-)
G97411 NA other upstream 160550 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 252442 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 390857 8361614 ~ 8370031 (-)
G97455 mark2a,LOC107715377 other upstream 439230 8409987 ~ 8411882 (-)

Expression


Co-expression Network