G97409 (gng3,LOC107559409)


Basic Information

Item Value
gene id G97409
gene name gng3,LOC107559409
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8124268 ~ 8126464 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121445
AAGAACAGCACCATTTACCCGCTACAGTCTACAGTTCATAAAGCATAGCCCCCCCGCCCACGTACAACACAGCAGAAAGTCCCCccactcctctccctctctccctctcacagcAGGGCACAGAACAGCTTCTTCTCTCGGAAGGGGTTGTCAGAGGTGGGCACCGGGGTGAGCAGCGGGTCCTCGCAGCAGTGGGCGTCGCAGTATGCCATGAGCTCAGCCGCTGCCTTCGACACCTTTATCCTGCACATACTGGCCTCGATCTTCAGCTGCTCCACCAGCTTCCGAGCCTGAGACACACTCATAGTGCTGTTCACTGGGCTCTCTCCCTTCATCCTGAGAGACTGTATCAGGTGTAGCGATTGGACTGGGTCAGTCACTTAGGCCTGGTTCcctcctctttttctctctctctctccttactctcctctcttgctctccgGTGGCTTCAAGGACCTGccctttctgtctctcctcctctctctctacctctctatctccctccctcctctgttCTCCTCCTCAGTCGtgttctctccttctctcctctctctctgtctcagggtCGTGTAGCTTTCCGTCTGCACCACACCCTGCTATCGAACAAAGCCAGAGATCACCTCCACACTACACCACCGCACAGTACattgtagtgcagtgcagtgcagtcctAGTCACTACCATCCAGAACCCTCCCCTTTGCTGTCAGTGGTACTTCCCAAGGAGCTGCATTGGAGTGCATTAATTGGGTGGGGTGGGCCGGGCTATACCATGCCAGGGCTGGTggagggggaagaggagagaaCCCAGGGGTACCACTCCTTCTTAGCATCTGTCACTCACAGAAGGAGCCAGTCCTACGGAGTGTAAATAAtgtctacagagagagaggagagcgtGATggcgaggggagagaggagtaCATACCAGCACCTCACACTACCAACCCCCGTCTGATTCCGTTACCATGGCAACCGCTGCAGTCTCTCtgcctgttttctctctctttgtctttcACACTAacctctctcctctccaattccctctctcctctccctctccatttacatgttctctctctctctctttgccttttttcctt

Function

symbol description
gng3 Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex. Is expressed in nervous system and trigeminal placode. Orthologous to human GNG3 (G protein subunit gamma 3).

NR:

description
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121445 True 1102 lncRNA 0.55 3 8124268 8126464

Neighbor

gene id symbol gene type direction distance location
AMCG00015337 NA coding downstream 2414 8115447 ~ 8121854 (-)
AMCG00015342 NA coding downstream 10811 8109473 ~ 8113457 (-)
AMCG00015332 LOC107559259 coding downstream 129586 7971864 ~ 7994682 (-)
AMCG00015331 NA coding downstream 162379 7958966 ~ 7961889 (-)
AMCG00015328 NA coding downstream 182284 7939137 ~ 7941984 (-)
AMCG00015338 NA coding upstream 49 8126513 ~ 8131083 (-)
AMCG00015336 NA coding upstream 7825 8134289 ~ 8143347 (-)
AMCG00015341 NA coding upstream 18035 8144499 ~ 8146914 (-)
AMCG00015340 ovol1,LOC108267728,LOC103038355,LOC108434587,LOC107595316,LOC105029478,LOC107675488 coding upstream 24995 8151459 ~ 8157408 (-)
AMCG00015339 LOC106604708,LOC105028071,LOC106611761 coding upstream 39946 8166410 ~ 8174682 (-)
G97395 NA non-coding downstream 55231 8068780 ~ 8069037 (-)
G97244 NA non-coding downstream 108195 8001486 ~ 8016073 (-)
G97221 NA non-coding downstream 153511 7969597 ~ 7970757 (-)
G97134 NA non-coding downstream 304079 7819804 ~ 7820189 (-)
G97130 NA non-coding downstream 308866 7814894 ~ 7815402 (-)
G97475 NA non-coding upstream 305459 8431923 ~ 8433316 (-)
G97536 NA non-coding upstream 470271 8596735 ~ 8598299 (-)
G97561 NA non-coding upstream 484483 8610947 ~ 8611396 (-)
G97562 NA non-coding upstream 486031 8612495 ~ 8634660 (-)
G97574 NA non-coding upstream 528709 8655173 ~ 8656821 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other downstream 32442 8070035 ~ 8091826 (-)
G97125 NA other downstream 337826 7786087 ~ 7786442 (-)
AMCG00015305 NA other downstream 675974 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 1200554 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 1227841 6891235 ~ 6896427 (-)
G97411 NA other upstream 4843 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 96735 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 235150 8361614 ~ 8370031 (-)
G97455 mark2a,LOC107715377 other upstream 283523 8409987 ~ 8411882 (-)
AMCG00015374 NA other upstream 414724 8541188 ~ 8545795 (-)

Expression


Co-expression Network