AMCG00015677


Basic Information

Item Value
gene id AMCG00015677
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16315488 ~ 16324527 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015677
ATGattgACAAAGTGTACAGCATTCAATATTCTGTGTCTTTCCTTCAATCTGAAGTTATAAGCTTTAGCAACGGCTCCATCCAGGTTGACCTAGACCTGGTGTTCAACAGCACCGGTTCAGTCCCCAATATAACCACAGTCATCAGTGTTCTCCTGATGGCCATTGACCAGGGCAATATCTCTCTGCCCATTGACCCAATGTCCATTAAAGGAAGAGAAGTAGCGACAACATCGGCTCCACCCACCACAGCTGCTGCAACTACGACCCCAGCTGTGACTATGCATAGCACTGGATCTGTGAGCAACAGCACATCTGCCTCTGCCAATACCAGCACAGTAGCGACAACATCAGCTGCACCCACCACAGCTGCTGCAACTACGACCCCGGCTGTGACTATGCATAGCACTGGCTCTGTGAGCAACAGCACATCTGCCTCTGCCAATACCAGCACAGCATTCAGCACTCCTACCACTATTAATACCAGCACAACCTCCCCCAGTTCCACCACTACCCTCCCTGCCACCCCAGTACCTCAGAACACAATCATGCTGATCTTCAAAATTGTGAAGAATTTTACAGAGGCTTTGAATAATAGAAACTCTCTGGAATTTATCAACCTGGCCACAAATGTAACAAGTGAGTCCACCGGCCTACTGGGCATTTGTCTGGTATGCTGGAAGGCCAATCCCAGATTCATCCGCACCTTTGTGGTGAAGTTTAGGAGTGGCTCAGTCATTACTGATCTGGACGTGGAGTTTAACAGCACAAAGGACATTCCCATGGACAATGACATCATCCAGACCTTCAGGAGTGTAAATTTTTCACTTCAAGTCGATTTTAACACCATTAACATCACCCGCAATGAGAACACCACAGGCTCTGCAGCTCCTCTCAGCCCCTCCAGTCCCTTCCCAGCTCTGCTGTTCTCTCTCCTTGCTGCGCTCCTCTCAGCCAGGCTGTTCCTGCACTAAACTCTCCTGTCAGAGACCGTCCTGCCAGAAAGCAAGTGTTCCTTCTGGCATTGCAAGAAACACTCCTGTTTTTCCCCAGAGGTGACCAGAGTTAAATCCATGCCATTGTTTTCTCCGCCTGCAAAAATAGAGCAGAAGTTCTGTTAAAAAGTCACCCTCGGTATCCTAAAAAACTAAGGGGTCGACAAACATCAGGCTCAAATAAAccaacatttgctttttaaccCCTGTTCCTTAGAAATCccagtttacatttaaatgcagtacTGTGCCAATATTGATAATAGCAAAACTAACACTACACTGTAAAACCCAATAAGTTAATTGAACTCAAAATTTTTTTTGAAACTGATTACATCGAAAAGTAACACTAATTCAATTTTATAAGTTAAAGCAACATTCTTTAGTAAGTAGGTTTAAACAGGTAACTTTAAGTGACActaactaattattttaaattaaagaagcaTTCTTTATTATGTTGCTTTTACTAAGTGATTTTAAGTGACATTTAGGTTAATTTGATAATTTAAAGAAACCTTCTTGATTAAGTAATTTTTACTAGGTATTTTGTGTTCatagtacaaattaaaattaagtacaggtaaaacatttttattacctttatcaaaaaacatttaatttctcatCAACAAATTGTCCACAGTTTACTtggtttttaaattaagatgtaCAAACTAATGCATTAGGTAACCAACTCTAAATTGctatacacattttgaaataaaaaaaacaggtcaacacaatttaaatttaagttaCTCTTTTATTaagtaaacataaaacattaacattaacacgTGGAACAACGTTATTGCATGAAATTGTCAAACCGCTATGCAAACCATCCCCTCATTCCCAAACGTGCATCTGCTATTTTGAGGTAGTACAATTTCTAGTTAGGCTAccataaaactacaaaaaaattaGATCTATGCACAAGTGACGCAATGAGactaatgctggggtcacactacacgatttctacaatcagacacgattttgtgaacagtaggcgactcacacttaacgactattttgcaccgaatttgtgtcttttgcgtcatgaaggagcgcacacagtacagacacacactgactgatctgACATGCTTGTCGtcgatctgcgtcacagcctgcAAACTCCCACATCCCACAGAAACACGCGTGTTCCACACAGATAAAAGGCCAACAAACacgttcgtgaagtgcagatgtccgcagttaattgaatttacaaattaacataTATGCAGCAATGTAACTTAATCcttgtattcataataatatctAACACATTTAAGTTAATGGTAGCTCCTCTGTTTGTCACACTGGATGAGCATTAAATGATGCTGGTAAGTTTATATCATGATAGCGAAAGGGGAGGGAGAGTTTTAACTCAACCgcacatttttggttttgtctggTTCATTAAAGTGTCCCATTACCGTGTTCACTGTACACACAGATGCCAGATGCCGACCAGGCCTCTCAACACCACAGCTGCCTCACTCTCCCAAACACAAAGTGGATCCCTTTGATGCTTGATTAAAATATAGTATGGGTCACCACAGATCCCCAGACAATTTTCACATGCTTTAATGACTTTATGTCATTCATCTTATGAAAATTGTAATGTATGGTAGAGCGATCATAtatctaaatgtatatatgcaagATATAGTATTTAAATACTAATACATTGAACTGACAAAATAAGCATAAGGATTGCAGACTAAAATAGCTTTCAGATATGCCCCATAAGGCAAAGTAACGtgaggagagagacagtgaggaatgtgtttgtttagcGACTGAAAGCCTGAGGGAACCACTTAACCTTACAGAACAAAGctatagttattttaatatattgtgtgcATATTTCATAtccatatgtttattttatatgttgaaaacaTATCTTTGACGTTAACCTCACCATACATAAATTACAGACTaacatatgtaatatgtatcCAATGCATTCTAATTACACAACAAATTGGGACACTActggcaaattaaaaataaaaggatttccACATTTGTACCATAATTTCAAATATAGGTTTGTTCCTTATAAGGACGTGGCTCACAGATATGCCCTCACAGTTTGAGCGACATAGATTGATTGCACATTTGATAGTAGAGTTTAAAGTCCTCTGTGAGTGACATTGTCCCTCAGTTCTGTGCTGGTGTGTCCTGTCCTCTGTGCCACTGTGTTGATTAATGAAAACTGCCTTGAATCCAACTGTACCACCGTTGTCCACTCCTGT

Function

GO: NA

KEGG:

id description
ko04928 Parathyroid hormone synthesis, secretion and action

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015677 True 3272 mRNA 0.40 10 16315488 16324527

Neighbor

gene id symbol gene type direction distance location
AMCG00015676 NA coding downstream 42841 16252419 ~ 16272647 (-)
AMCG00015672 NA coding downstream 255487 16057802 ~ 16060001 (-)
AMCG00015667 NA coding downstream 501129 15792513 ~ 15814359 (-)
AMCG00015664 NA coding downstream 757712 15555165 ~ 15557776 (-)
AMCG00015662 NA coding downstream 976426 15338036 ~ 15339062 (-)
AMCG00015680 NA coding upstream 121445 16445972 ~ 16448187 (-)
AMCG00015683 NA coding upstream 136195 16460722 ~ 16463940 (-)
AMCG00015690 NA coding upstream 212020 16536547 ~ 16546886 (-)
AMCG00015695 NA coding upstream 250731 16575258 ~ 16579210 (-)
AMCG00015696 NA coding upstream 257168 16581695 ~ 16590999 (-)
G99679 NA non-coding downstream 3518 16311708 ~ 16311970 (-)
G99623 NA non-coding downstream 185193 16130064 ~ 16130295 (-)
G99614 NA non-coding downstream 247359 16060196 ~ 16068129 (-)
G99596 NA non-coding downstream 311458 15999802 ~ 16004030 (-)
G99594 NA non-coding downstream 325225 15987084 ~ 15990263 (-)
G99724 NA non-coding upstream 100223 16424750 ~ 16428626 (-)
G99735 NA non-coding upstream 172958 16497485 ~ 16498531 (-)
G99710 NA non-coding upstream 179264 16503791 ~ 16527927 (-)
G99758 NA non-coding upstream 236058 16560585 ~ 16572276 (-)
G99777 NA non-coding upstream 274566 16599093 ~ 16600378 (-)
G99646 NA other downstream 93333 16221765 ~ 16222155 (-)
G99605 NA other downstream 213032 16017583 ~ 16102456 (-)
AMCG00015666 NA other downstream 612198 15687642 ~ 15703290 (-)
G99454 NA other downstream 1055004 15259461 ~ 15260484 (-)
AMCG00015660 NA other downstream 1062767 15249901 ~ 15252721 (-)
AMCG00015681 NA other upstream 142772 16467299 ~ 16473177 (-)
AMCG00015691 NA other upstream 199587 16524114 ~ 16535468 (-)
AMCG00015694 NA other upstream 267701 16592228 ~ 16611444 (-)
G99939 NA other upstream 1513053 17837580 ~ 17837942 (-)
AMCG00015723 lsm6,LOC106610200 other upstream 2303078 18627605 ~ 18630665 (-)

Expression


Co-expression Network