AMCG00015724


Basic Information

Item Value
gene id AMCG00015724
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 18601232 ~ 18617687 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015724
ATGAAAATCACCCCAGAGCAGCTCGTCTGGGTAGGGGTTGCTCTCAGCCTGGTGTCCTACGTGTGTGGCTTCTCTCACGGAGCAAACCCGTCTGCCTGCGCTGACATGAAGCCCAAACACATCAGTGCCCAGGCCCTGGACTCTCGCAACTACATCACCCTGCAGACAGACATGCTCTTCTACAAGCCTGGAGACACTGTGCCAGTGATGGTCAGGAGCACTCGAGACTTCATGGGCTTTCTGCTGCAGGCGAGGCAAGTGACGGACAACCAGATCGCGGGCACCTTCGTCCTCATACCGCCAGGCTCTCGGCACCTCAACTGTGGGCAGAAGGGGGACACTGTCACCCACTCGGACAAACTGCTCAAGAGAAACCTCTCCTTCATCTGGAGGGCCCCTGACCAGCCCTCTGGAGACATTCGATTCTTTATAACCGTAGTGCAGTCATACTTCATTTACTGGGCCCGGATTGAGTCAAATGTTGTGCTTGATCAGAGTAACCTGAAGTCAGTGGATGCCTCTGGTGGACAGGACCGCACGCCATCTGGACTTCAGGTGGACAACAGCACAGCAAGCACAGGTACAGATCCAACCACACATCACATTGCAGTGGGACGCCCCAGCAGCGAGGAGCAGGAGACGACCGCAGAGCAGAGCACCCAGGGGGAGAGACTGCCCTCCGTCCAGCCATCGGCACACCTCAGACACAGAGGGGCCCCTGTGTCTCTGACTGAGCCAGGCAGCTCCCTCCCATCAGTCTCACCAGCTCAGAGGGGCATCGAGAGACTCCTTCAACCTCCTGAACAACTCCCACTGGGACCACACTCCCTACAGCCAGCACTGGACCAGACAAGAAGCCTCAGCGCCTACAATGCATCTCAACTGTGCGAGAACTGCAGCCGTCGAGGAGAACTGAGCAAAACTGGCCCAAGTTTTGAAGTTCCTACTTTCAAAGCCTTCACATCCCAACCCAGCCCACGGGAGACCCCTCAGGAGGGGTCCCAGGCCCCGCAAGCTCCAACCACTGATGCCTTCCAACCTTCCCTGGCCCTGAGGAGgccagaggcagagagagagacaccagagATCCTGGCACAGCTCCTCCAGCCCTCACCCGCTCCGAAAGAAATGCAGCCCAAGAGTACAACTCCTCTCCCTGCTTCTCCTCACCTCAAGCCCTCCCCGGCACCCAGGCGTTCGGACTCTGACAAGGTGACCCAGTTCCAGCAGACAGAAGAGGTAGAATCCCGGGTGCAGAAGGGCAGTGCCGCCCGAAATGTATCAGGCGGGAGAGTGATGAGTCCCCCCAGAGAGGCTGGCACCCCAGGAAAGGGAGAGAAGGCTCCAGGGAAGGGTCCCCACTTGGGTGCCACCGAGTTGGGTATCCTGCTGGGCTGCTCGGCGGCTCTGGGCATGGCGCTGGCTGCAGGCCTCAGGTACCTGCACGCCCAATACTGCCACAAACGCACCGAAGTGTCCTTCAGCGACCATGGCAGCAACGTCATCCACGTGCAGGAGTGTGGGGATCTGGTGCAGGTGCGCAAGATCCGCCAGAACAGCTTTGTGCTGCTGCAGGCAGAGTACAACATCATCGCCCCCCCCGGGAAGTGA

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015724 True 1611 mRNA 0.59 6 18601232 18617687

Neighbor

gene id symbol gene type direction distance location
AMCG00015722 pou4f2,LOC107550641,LOC101063993,LOC107670704,LOC102237073,LOC107742546 coding downstream 162083 18437740 ~ 18439149 (-)
AMCG00015721 pou4f2,LOC102790387 coding downstream 163753 18437183 ~ 18437479 (-)
AMCG00015720 LOC107565324 coding downstream 479471 18102674 ~ 18121761 (-)
AMCG00015719 NA coding downstream 528514 18071300 ~ 18072718 (-)
AMCG00015718 NA coding downstream 545317 18047191 ~ 18055915 (-)
AMCG00015729 mmaa,LOC106610208,LOC107550599 coding upstream 122373 18740060 ~ 18770335 (-)
AMCG00015730 smad1,LOC105020940,LOC106610220 coding upstream 157673 18775360 ~ 18783878 (-)
AMCG00015732 abce1 coding upstream 212380 18830067 ~ 18839249 (-)
AMCG00015733 NA coding upstream 242574 18860261 ~ 18862808 (-)
AMCG00015735 LOC106602344 coding upstream 258801 18876488 ~ 18919607 (-)
G100040 NA non-coding downstream 3036 18591452 ~ 18598196 (-)
G100039 NA non-coding downstream 40285 18560715 ~ 18560947 (-)
G100038 LOC100136012 non-coding downstream 84503 18516451 ~ 18516729 (-)
G100019 LOC103376870 non-coding downstream 202211 18345234 ~ 18399021 (-)
G99997 NA non-coding downstream 456715 18144276 ~ 18144517 (-)
G100102 NA non-coding upstream 118769 18736456 ~ 18737039 (-)
G100109 NA non-coding upstream 181883 18799570 ~ 18806676 (-)
G100185 NA non-coding upstream 514673 19132360 ~ 19132566 (-)
G100218 NA non-coding upstream 1007373 19625060 ~ 19699829 (-)
G100222 NA non-coding upstream 1054055 19671742 ~ 19701459 (-)
G99939 NA other downstream 763290 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 1989788 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 2065764 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 2128055 16467299 ~ 16473177 (-)
G99646 NA other downstream 2379077 16221765 ~ 16222155 (-)
AMCG00015723 lsm6,LOC106610200 other upstream 9918 18627605 ~ 18630665 (-)
AMCG00015752 NA other upstream 1357269 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 1609680 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 4063007 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 5126103 23743790 ~ 23746703 (-)

Expression


Co-expression Network