AMCG00015864


Basic Information

Item Value
gene id AMCG00015864
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 26235005 ~ 26240136 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015864
ATGCACTGCTATGAAGTAATCCCTGAAGGTGCAGTGTGTAAACTGTACTTTGATTTAGAGTTTCACAAGCCATCTAATAAAGGACTGGATGGAAAACAGATGGTAGCCTCCTTAACTCAGTATGTGTGTCAGAAACTGCAAGAGGATTATGGGATTCAGTGCTCGGATAAGGATGTTCTGAATTTGGATTCCAGTACTAATGAAAAGTTCAGTCGACATCTAATATTCCTGCTTCCGAATGCAGCTTTTAAAGACAACGTGCAGGCTGctttgctttcaattgaagGTCATTTTATCAACAAGATCTTACAACCTGCACTTGAGGAACTGCAGAGGAGAAGAAACCATGAGTTGACAGATGGCGCCCCAAAGCAGAAGGATTGTCCTATAAATTCTACAAATGACCGGCCTCCTCTTTCACCTGTTGAAAATGTGCAGAAACGTGACGCAAATATACAGAAGAGCCCTCAaccaaaaagaaagagaaatggcGATCTTCAGGCCACGTCGTCCAATCAAGCTGGGGACTTGGCATTCCTGTTTGTGAAAGATAAAAATGGGAGGGATCAGCTGTTCATTGATCTTGGAGTCTACACAAAGAACCGAAATTTCCGGCTGTACAAGTCCTCCAAAGCTGGGAAGAATGTGGCGTTCACCGTGGCAGAAGACAACAGATTTGTCCCCAAGGCTCACCAGCGTGTCTCAGAAGAACAACAAGTATTTCTGTCCTCAATCGTCAGCAACGTTAGGTTCTCGGAGAATCTGAGGATCCTAACATGTGACACTGCAGAGGCGAAGAAAGCACAGAACCCCCCCTCATCTCTGCTTCCCGCCTGCAAATCAGcATTGGTTACAGGAGCTCTGAACTCCCCGTACACAGAAGTGGATAACTTTGTCCTGTGTCTGGTGAAGAAAGACGGCATTCAAGGAAGCATTAGGCAGTGGAACTATTTTTCTTCCGAAGAGCTTCTCGTCTATGACATTGTGAAGTTCCGCTGGTGTCACAATGTGGACAGGTTCCACAAAAGCAACAATATCATGTTTGTGGTGGATCTTAAACAAGAGCTTTGGTATCAGAAGTGTCACGATCCTGTCTGCAGAGCTGAAAATTACAGATCTCCAAGTTTCCCGTTACCTCGTGAAGTGTGTCTTAGCTACCTCATGCAGGAGGAGGAAGGGGACTTTGCGTACGCTATGGATGAGGCTGGGACGATTGAACCAAGCCAGGGGTTCCAGTCTCAGGACAGCGAGACCCAAGCAGCCCACGTACAGTGTCCTCCGTCTGGGGCTCGTTCTGAAGACGGGGTGGACTGGCCTGACGACCAGGCTTATATTGAGGCTCTGGAGGACGTGGAGCAGAGAGTCTCTCTGTACAGAACACACGCACGCCGTGACAGTACACAGGCGGAGGAAATCCCAGATGAACTTTTACTAACAACGCTGACTGAGTATGAGTCTTTGACAAAGTGA

Function

GO: NA

KEGG:

id description
K22761 PRIMPOL; DNA-directed primase/polymerase protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015864 True 1470 mRNA 0.47 10 26235005 26240136

Neighbor

gene id symbol gene type direction distance location
AMCG00015863 helt,LOC102781250 coding downstream 58068 26173669 ~ 26176937 (-)
AMCG00015857 slc25a4,LOC102781543,LOC107562743 coding downstream 101149 26131082 ~ 26133856 (-)
AMCG00015861 NA coding downstream 117303 26062313 ~ 26117702 (-)
AMCG00015859 NA coding downstream 179816 26052985 ~ 26055189 (-)
AMCG00015855 NA coding downstream 189020 26042144 ~ 26045985 (-)
AMCG00015865 NA coding upstream 137 26240273 ~ 26240725 (-)
AMCG00015871 NA coding upstream 127588 26367724 ~ 26385388 (-)
AMCG00015874 stox2,stox2a,LOC107550915,LOC107684970,LOC107671062,LOC107559650,LOC107748824,LOC106610000 coding upstream 233718 26473854 ~ 26474183 (-)
AMCG00015879 NA coding upstream 236588 26476724 ~ 26494504 (-)
AMCG00015880 trappc11,LOC107559294,LOC107731725,LOC106909384 coding upstream 255228 26495364 ~ 26519876 (-)
G101181 NA non-coding downstream 189663 25995843 ~ 26045342 (-)
G101115 NA non-coding downstream 660084 25574403 ~ 25574921 (-)
G101103 LOC107702333,LOC107746031 non-coding downstream 832508 25399982 ~ 25402497 (-)
G101045 NA non-coding downstream 1490649 24744082 ~ 24744356 (-)
G101040 NA non-coding downstream 1605222 24629564 ~ 24629783 (-)
G101242 NA non-coding upstream 10987 26251123 ~ 26253246 (-)
G101249 NA non-coding upstream 23940 26264076 ~ 26264315 (-)
G101309 NA non-coding upstream 283523 26523659 ~ 26525730 (-)
G101317 NA non-coding upstream 333930 26574066 ~ 26574287 (-)
G101318 NA non-coding upstream 334249 26574385 ~ 26575210 (-)
G101067 NA other downstream 1234115 24992953 ~ 25000890 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other downstream 2488302 23743790 ~ 23746703 (-)
AMCG00015800 NA other downstream 3532756 22680694 ~ 22702249 (-)
AMCG00015761 herc3 other downstream 5955361 20227367 ~ 20279644 (-)
AMCG00015752 NA other downstream 6253448 19974956 ~ 19981557 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 1746619 27986755 ~ 27997677 (-)
AMCG00015891 wdr17 other upstream 1801427 28041563 ~ 28069876 (-)
G101456 NA other upstream 1921701 28161837 ~ 28257732 (-)
G101540 NA other upstream 2864093 29104229 ~ 29106160 (-)
AMCG00015936 med28,LOC107702388 other upstream 3923137 30163273 ~ 30168350 (-)

Expression


Co-expression Network