AMCG00015985 (gucy1a3)


Basic Information

Item Value
gene id AMCG00015985
gene name gucy1a3
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32449500 ~ 32456878 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015985
ATGTTTTGCGCAAAATTGAAAGAGCTCAAGATCACCGGAGAGTGTCCATTCTCCAAACTGGTGCAGGGCACGGATCCGGGGGATGTGCAGGAGGGTAGCAGCGACCCCCAGGCAGAGGTCCCCGCGGAGCCCATCTCCAGAGCGGTGTCCGCGACCCAGCCGCAGCGCAAAACCAGCAGGAGCAAAGTGAACCTGCAGACGCTGGGGCAGAGCATCGGGAAACTAATCTGCCCGGAGACATTATCATTATTCTTCTATTATAGTGACTTGTTTTGCTTCCTCTGCAGTCCTGCCGCACTTTATTCAGATGTTTGTCAAGAAGTATTCAAGCACTTTGGGAACACAGATGTCTTAATCGAGACAATAGGGACTTACTCGATTAAATCAGgTATCCCGATGGATACCGTCAAGGTCTCACTGGGTGTCGAGCTGTTCAAAATGTGCTACGAGGAAGACAAACACATTCTAcgtgtggtggggggggcgcTTCACAACTTTCTGAACAGCTTTAATGTCTTGCTCAAGCATAGTACTGTGCCAGGCACCGGGGAAACTGCCACAGCTGCGAGAGACGCCTCCGTCCTTTGCCTGGACAAGGACCCAGGTCTTCTGACCGTCTACTACTTCCACCCCAGCAAAACCACGGACTTGTTCTTCCCGGGGATAATCAAAGCCGCGGCCAGCGTGCTCTACCAGACCGAGGTGGACATCGTCTCAGAGCCGTCCTGCTACAGAGACCGGGACCCTGAGCTGCACCACCAGCCCTACCTGCTGTACACCGTCCTGGTGAGGAACGCGAAGAGCGCGTCCCCCAGCCCGCTCCGGACGCACTGCTCCGTGGACGTTCCTCTCTCACTTTTCCGCCAGACGTTCCCGTTCCACATCCTGCTAGACCGGGACATGGGTCTGCTGCAGATCGGGGACGGTCTGAGGCGGCGGCTGAGCAGGAAGGAGGTCCAGCGGAAGCCCGCGTTCCAGGAGCACTTCTCCATCGTGTCCCCGCTGACCAGCAGCACCTTCCAGGGGGTGTTGAGCATGCTGAACACGCAGTTCATAGCCGCCCACCACGCAGTACGCGTCTCCGATCGTCTCCACCTGCGGAGCagcagaaacacattttctggtGGAAGAGGCGAGGCGTGA
>TU127555
tgaacatcactgcccttgttctcaattctacacttttgatcatataccctaacatttcgATCGCTAGCTCCACCTGGCACAAAGCTCTTAACAGTTTAACTCGCACGGCGTCTCACTCACCTTGATGGGCTCCCCGTCCGGAGTGGTTACCTCCTCAGACAGCGCCATCATCTGCAGTGCCATCAGGGCAATCTGGGCAGCATGCGTCTGGCTCTCCTTATGCAGGCCGCCCACCACGCAGTACGCGTCTCCGATCGTCTCCACCTGCGGAGCagcagaaacacattttctggtGGAAGAGGCGAGGCGTGAAGTGCTTCTTCTCTGCTATCAACAGATGGTGTGCCGTTCCGGGAGACTTCTtctcttcatttgttttctttttttgtctgcCTTCCAAGCACAGACGGATATCGGGATGTTGGAGGAATAAACTGTGCCTGGATGCTAATTTCTGAAGGCAATTATCTGGCTCGGGATGCTGGGATCGTCTGCTGGTAATTCACCAAGAACATCCCTGATCTAAGCCATGAGCCCAACCAGGCTCTGTGTTCTCAGGCTGCCCACACTTACCCGGAGCAAATCCAATAATGACCTATTGAGTTAGTAGGAAAGGCAAACACAACCATGTCTACCAGCTCTTCAAGCTTTGGTTCTGTTTGTTACAGTGTTACAACTATACCCATACGATCTACAAGTCGTCCTTCTCCTTCCTTTTGCTCCATTCACCTGAGATAACATGTCATGTTATGTCATGTTATTGAACCCTCTTGACCTGCTCTCCCTGTGAGATGGTGCCGTCGCAGGAATTCAAATGTAGTGCTTCTCCTGCGTGACGCTGCATGGAACCGACTGATGAGACAGACTCTTCCCAGACTCGAGGAACGCATTTCCGCTCTGTCTTTGCATACATAACTGtacatcttttaaatgttttcatttctttgtccTACATTTATAATACACTATACATACTGTGTCTACAGGAGGTATTCACCCCTATTGAactgtttcacatttttttgtgttacaacctgaaattgtgacacattttaaaagggattttgtttccttttgttgaTCTGCACAACCTACTCCATATGTGGGGAAAAATGgagcagagaaaaaaacaaatcagttacAAATTTTATCCTGTAAAGTCTTCATTACAAAAGTATTCTCTGCCTCTCCTATTACACTcttaaataagctcaggtgccacatccagcaggacaatgaccccaagcacacagcaaCACTAGAGTGGCTTAAAAGCAAGACAGCGAAAGTCCTACAGTGACCCAGTCAGAGCCCGGACTTGAATCCCATTGAGAATCTGTGATGACTTGAAGATCGCTGTCCACCAACAATCCCCATCCAACTCGACAGAGCTGGAACAATTTTGCCCAGAATAATGGgcgaatattgcacaatccagatgtgcagacctggtagagacttacaccaaaatcacagctgtaattgcaaccAAAATTGGTTCCACCAAGTTTTGACTCAGGGGGGAGAATACTACATGAACTGTTGTTTCTCAAAAAacattgtgcttcttcaaaGTGTGGAGAAGGTTGTGCCAATCAAAggtaacaaaattaatttaaatctgtcAGAATTTCAGGTTTtaacaaaatctgaataaaGTCCAAGAGAGGTGAATACTTCACTTTTTATTCATAgtaagacaaaaacattttctttcacgCAGTGGCTGCAGTGTTTATGACCTCTGTCTCTCTGGTCACATTTACTGTGTTATTCGGGTAACCGGGATGGTGGTCTTTAAATCtagatgtgttttgtattttgctctAAAGTACAACAGCTGTGTCATGTGACCATGGTGTCATTTCCTGCAACAGGAACCAGCAGCTTGTCTGGGAGACATGGGATGGGTTTTGTGTTGGACTCCTGTTGTTTTGCCAGAAGATTTGCAGGAGGTCTGGAGCCAAACCACGAGCCGAGAGAGAGCCCTGACTCAGACAACCCACTCACAATCAGTGTTTACATTGCCGCTCGAAAgtgaaacactgaaataatttgtagATTGTTAAGTTTATTCCTTTAAAGAATTAAGTAGGGaggcattctctctctctctctctctctctctcaatactATATATAGGCAACATTAGTCAGTTAAGTGCACTTTTCTTACATCATGACAGCCACGATTCAAAAGTTGTGCTGAACTGTGCATTCCTCACTGACAGACACTGGAATTGAACAATGAGAAAATGGTTTTTAAATCAGTCACGACTGCAAAAGTAGAGACTCTATTGGTAAGAAAGTACGCTCTGACCTAGACTTGCTCTAGAGCaggtcatgtttttaaatgaagtcaATGCAGTAGATTTCTAttttcaagaaaagaaaacaaccgTCCTGAGCCTCACAATGAATCACATTGACCGTTGTGTAGCCTTGCTGCCATTATTCTAGGTATCTGGTTTCCAAATAAACCCCTTCATGCACTTAGTTAATCCACAGTAAACTTTATAAGATTTCTCCACGGTGAAATAATAGGACCGTCTCAAGTACGGAGCCTGACAGAATCTGAGAATAGATCCAGCGCCAACGATACTGCAAACTGCTTGTGCTTCTGCATCTCATTGTTTCAGTAAAGAGTCCCTTTTTGATTGTCACGCCTGATAAACcacaatttgtgtgtgtataactgAACAGCAAACACCAGCTACTTCTTCTACAAAGTTGCCATTTTCAGGAGCCAAGTTAATAGAAATAAGTCTGACTTACGACCGCACGGCTCAGTTACCAGGCACATTGTAATCCTTCACTAGTAATTAAACCTGCGGATACATTGAGTACAGTTTAATAGCTCCATTATGCCTGAGTATCGCCATCTATCATATTTTATGCGCTGCTTCTGCCGCGCCACATAAACTCATGTTCAGCTACAGGCCCCTCGGTTTCAGCTGTTTGATTGAGCCTTTGTtttagagcaggggtgtcagactccagtTTCAGAGCGTGGTTGAGAAGCATGGACCAGGGTGTTCCTTAAATCAcaaattggttttaaaacagGTAAGGTAAAAAAAAGATGAAGATAAGATTGCCCTGGGGGCCCTTGAGAGGACCCTGAGTGGGGGTCAGAGCTGGCTGGGGACATGGGGCCACCCCCCACCTTGTAGACGTCCAGCTCCCCGCAGCAGCGGTCAAAGCGCGTGTAGAGCTCGTTCAGCATGGTGACCACCTGCATGGGCGAGCAGGATGAGCACACGGCCGTGAAGCCCACGATGTCGGAGAAGAGCACCGTGACGTTCTCGAACTTCTTGGCCTGCACGGGCTGCCCCTGCCACAGCTGCTGCGCCACCCGGCCTGGGAAGATGGTGAACAGCAGGTCCACGGTGcgcttcttctcctcctccagggcccGGTGCGCGCACTCCAGCGCCGCCTTGGCCTTGCCCAGCCGCTTCTTCAGGCCGTCCTGGGCCTTGGCCTGCTCCCCCACCAGCACCACGTCCCTCAGCGCGTTGTGGATGGGGATGTCGGACAGGTACAGCCCACGGCCCGTGAGCTCCTCCAGCCGGTCCACACAGGGGGAGCCCAGGAACAAGAGGGCATCCGCCTCAGAGACGAAGATCATCTGGCCCTTCAGGTCCATGAGCT

Function

NR:

description
PREDICTED: guanylate cyclase soluble subunit alpha-3 isoform X2

GO:

id name namespace
GO:0016829 lyase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015985 False 1143 mRNA 0.57 4 32453098 32456878
TU127555 True 3654 TUCP 0.47 2 32449500 32453409

Neighbor

gene id symbol gene type direction distance location
AMCG00015983 tdo2 coding downstream 49407 32395174 ~ 32400093 (-)
AMCG00015975 glrb coding downstream 199002 32229546 ~ 32250498 (-)
AMCG00015976 gria2,LOC106604527 coding downstream 241185 32164194 ~ 32208315 (-)
AMCG00015974 NA coding downstream 368484 32078493 ~ 32081016 (-)
AMCG00015973 NA coding downstream 371441 32077227 ~ 32078059 (-)
AMCG00015987 LOC105030636 coding upstream 42333 32499211 ~ 32507480 (-)
AMCG00015989 NA coding upstream 129822 32586700 ~ 32598705 (-)
AMCG00015990 sfrp2,LOC106602749 coding upstream 143945 32600823 ~ 32603839 (-)
AMCG00015991 NA coding upstream 182893 32639771 ~ 32676388 (-)
AMCG00015997 plrg1,LOC107757621,LOC107695461 coding upstream 225537 32682415 ~ 32689889 (-)
G102092 NA non-coding downstream 86637 32362463 ~ 32362863 (-)
G102020 NA non-coding downstream 495852 31952908 ~ 31953648 (-)
G101996 NA non-coding downstream 624804 31824435 ~ 31824696 (-)
G101911 NA non-coding downstream 1478613 30892328 ~ 30970887 (-)
G101859 NA non-coding downstream 1689076 30754887 ~ 30760424 (-)
G102149 NA non-coding upstream 73393 32530271 ~ 32530594 (-)
G102234 NA non-coding upstream 207894 32664772 ~ 32681331 (-)
G102237 NA non-coding upstream 241149 32698027 ~ 32698376 (-)
G102261 NA non-coding upstream 339227 32796105 ~ 32796333 (-)
G102281 NA non-coding upstream 439937 32896815 ~ 32897014 (-)
AMCG00015984 gucy1b3,gucy1a3,LOC107572203 other downstream 2535 32423128 ~ 32446965 (-)
AMCG00015979 NA other downstream 59488 32386913 ~ 32390012 (-)
AMCG00015965 NA other downstream 479213 31954646 ~ 31970287 (-)
G102017 rapgef2,LOC102783712 other downstream 504325 31908489 ~ 31945175 (-)
AMCG00015960 NA other downstream 732170 31707378 ~ 31717330 (-)
AMCG00016006 NA other upstream 452298 32909176 ~ 32938058 (-)

Expression


Co-expression Network