AMCG00015991


Basic Information

Item Value
gene id AMCG00015991
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32639771 ~ 32676388 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015991
ATGGAGGGCTCCGCAGTGCGCACCTCTGCGCTCGCTGCGCTGGTGCTGGCAGCCGTGCTGTGCGCTCAGTGCTCCGGCCAGGTGTACAACCTGACCCTGTCTATCGAGGAAGGGCTGCCGGCCGGCACCATCGTGGGGGACATCAGGGCCGGGCTGCCGGAGGACACCCCCCACAGCGGCTTCTTCATCTCGGAGAGCAGGGAGTCCGACGTGTTCAGAGACCTGGACATCGACGGGGACTCGGGGATCATATCCACCACGGCGCCGCTGGACCGGGAGAGCAGGGACCGCTATGAGTTCGTGGCGGCCACCCTGACGGGGGAGGTCATCAGGGTGCAGATCTGGGTGCGAGACGTGAACGACCACGCACCCGTGTTCCCCCGGGCTGCCCTGCAGCTGGACGTGTCAGAGCAGAGCCCGGCCGGGACGCGCTTCCAGCTGGAGCGGGCGCGGGATCAGGACGAGGGCGAGTTTGGGATCAGCGGGTACCGCATGGTGGGTGCGGTGAGCTGGGGGCCCTTCCAGCTGGACTACAGGAAGGGCGGCAGCGAGGTGTTCAGCCTGGACCTTGTGCTGTCCGGCCAGCTGGACAGGGAAGCGGTGGACGCCTACTCCCTGGTGATCGAGGCGTTTGATGGGGGCAGCCCTCCGAAGACAGGTCGGCTGCGGGTGGAGGTCAGCGTCTTGGACGAGAACGACAACCCGCCCGCCTTCAACCAGACGGAGTACCGGGCGCTGGTGTGGGAGAACGCCCCTCCACTCACACCCGTGTGCCAAGTCTTCGCCACAGACCGGGACCTGGGCCTCAACGGCCGGGTTGTCTATGAGATTAACCGGCGCCAGAGCGACCCCAGGGAGCTGTTCGCCATCGACGGCAGCACCGGGGTCATCAGGGTCAACAAGCCGCTGGACTACGAGACGCAGCCATTCCACGAGTTGATCGTCCGGGCCCGGGACGAGGGCGCCCAGCCGGAGTACGCCACCACCCTGGTGGTGGTGAAGGTGCGAGACGTCAATGACAACAGCCCGTCCATCAGCGTAATGTTCCTCAGCGAGTCCGCGGAGCCCGAGGTGTCTGAGGGGGCGGCCGTGGGGGACTATGTGGCCCGGATTTCGGTGTCTGACCCGGACCTGGGGGACAGTCCGGGGCTCAGAGTCTCTCTGGAAGGCGGCGAGGGACACTTCGCCCTGAAACCATCCGACAACTTCCTGTACTTCCTGTGTGTGGACGGGCCGCTGGACCGGGAGGCGGTGGACCTGTACGAGCTGAAGGTGGTGGCCGCTGACCTGGGCTCCCCACCGCTGTGGAGCGAGAGCACCTTCTTACTCAGGGTGACGGACGAGAACGACAGCCCCCCGGCCTTCACGGAGGCGCGGTACATGGTGAGCGTGCGGGAGAACATGGCGCTCGGGACGGCTCTGCTGCAGGTCCACGCCCGGGACCGGGACGAGGGAGTCAACGCCGCTGTCCACTACTCCATCGCGAGTCTGGACCGGCCTGCCCTAGTCAGCATCGACGCTGCATCGGGCCTGATCACCACAGCGGCGCGGCTGGACCACGAGGAGGTCGCCGTAATCCGTTTTGTGGTGGTGGCTGAGGATGGGGGCAGCCCTCCGCTGTCCTCGACGGCCGCGGTCACCGTCCACGTGGAAGACATCAACGACAACAAACCCGTGTTTGAGCGCCAGCTGTACAACGTGTCGATCCCAGAGCACTCGCCTGTCGGGAGCTGCTTCCTGCAGGTAAGGAAACGGGCCGCCGTGGGGGAGGCAGCTGTGGTCTCCTGTGCtgagttttctttcctgtcctgtcctgtccatCCCCACACGCTGTCTCTGCTCTCCCCACAGGTGACGGCCACGGACGGTGACAGCGGCGCATTCGGTGCAGTTCGCTACTCCCTGTATGACGGCTTCAGCAACCACGACCCGCCGCAGCTCTTCCAGATCCGGCCCGACTCCGGTGAGCTGTGTGTGTCACGGGACGTGGACAGAGATGGGGGGCTGGCCAGCCACGATGTCCTGGTCAGAGCTGAAGACGGGGGTGGGCTGAGCGCTCAGACGTATGTTCACATCAGTGTGGAGGACATCAACGACCACCGGCCCGTCTTCAACCCCGACAGCTACGTCACCAGCGTCAGCGGCCACGCGCAGCCCGGCACCGAGGTCCTGCGCGTCATCGCGGCCGACGGGGACTCGGCGGAGTTCGGCCAGGTGACCTACGAGATCGTGGCGGGCGACCTGTCGTCCCCGTTTGCCATGGACTCATCTACAGGCGTCCTCTACCTGACCTCGACCCTCAGCCACCTGGGCGCCTCAAGCGTGAAGCTGTCCGTCTCTGCGCGGGACGGGGGTGGGCAGCTCAGTCCGGCCCCCGCCTCCATCACTGTGCACATCCTGCGCAGCGGCCTGGAGCCCGCTGTGTTTGACCGGCCACGCTACTCCTTCTCCGTGCCCGAGGACGCTGCCCCGGGGACCAGCGTCGGCACTGTGAGGGCCACCAGCCCGGCCAACTCCCTGGAGTCCCTGTCCTACCGCATCTCCTCAGGGGACCCCCTCGGCCTGTTCTCCATCCACCCCCAGTCTGGTGTCCTCAGCACGCGCCGGCCGCTGGACCACGAGGCACGGCCGTCCCTCAGCCTGGTGCTGCAGTGCCAGAGCGGCTCGTCCCCGGCCTACAGCAGCACGGAGGTCCACGTCTCTGTCAGCGATGTCAACGACAACCCGCCCGTATTCCTGCCGGTGGCCGAGTCCATCTCGGTGACCCAGGGCACAGCACCGGGTGCGGTGCTGTACGTGGCCCATGCCCACGACCGCGACAGCGGCACCAACGGCAGGGTGCGCTACTTGCTACGGGGGGGTGACTCCGCGGCGTTCGCCATAGACCCCCGCCTGGGCACCCTGACCCTGGTGCACAGCCTCCCCCCGGACGGCCCGCCGCGCTATGGCCTGACCATCGTGGCCGAGGACGAGGGCGCCCCCCCGCTGAGTGCCACAGTGGGCCTGTCGGTGAGTGTGGAGCGGGCCGCGCCGGACGCTCTGGCCTTCGAGACGCTGGTGTACCAGGTGGAGATCGGCGAGAGCACCCCCCCCGAATCCCGCATCATCCAGGTCCGGGCCCACGGCCGATGGCCCCACAGCCCGCCCAGCCTGTCCTACTCCCTGCGGCCCGACGCTGGGGCCGCACCATTCGATATCCAGGCGGAGAGCGGCTGGTTGTTCCTGCGCCGGGCTCTGGACTTCGAGGCGTCCCGGGGCGTGCGTTTCAGCGTGGTGGCCTCGGCCCGGGAGGGGGGGGTGGCGCTGTTCGCCACGGCCACGGTGCTGGTGAAGGTGCTGGACGAGAATGACAACGCGCCCGTGTTCCCGCGGGACGCATACTTCTTCACTGTGCAGGAGGGCCCCGTCCCGCACGGCCTGGTCGGCACCGTGGCCGCCTCCGACCGGGACTCCGGCAGGAACGCCCAGCTCTCCTACATCTTGCTGTCGGACGGGAAACACTTCCGCATCGACTCCAAGACCGGCGAGATCATTAACTGGGTGGCTCTGGACCGCGAGCTGCAGCCGCACCACTCCCTGACTGTGCTGGTGACGGACCACGGCCTCCCGCGCCTCAACGCCAGCGTGGCCGTCCACATCCTCGTCACCGACGTCAATGACAACCCGCCGCAGTTCACCCGCCTGTCTGCCGCCAGGGAGCTCACGGCACAGGTGTGGGCTGGCCAGCCTGCCGGCACGGTTGTTGCCACCCTGTTTGCCAAGGACTTCGACTCTGGAGACAACGGGACCGTCCTGTACACGCTGAGTTCAGAGGATGGGCCGGGGCATTTCCACATCGACGGCAGCACCGGAGAAATTAAGACGACGGACAGGTTTTCCCAGCGACCCAGAGCTCAGTACAGCCTATCGGTGATGGCCAGAGACGCCGGGTCGCCCCCCCTGCAGCAGAGCGCCCTGGTGCACATACAGGTGCTGCCGAACTCCGACCAGGGGCTCCTGCGCTTCTCCGTGAGAGAGGACTCCAAGCCTGGCACAGTAATCGGATCAGCGCGGTTCCCCGAGGCCCGTGGCGGGGACTTCGTCTACGCCATCGCGGAGGGCGACGGGAGTGTCCACTTCGGGATCGACGGCTCCTCGGGGGACCTGTACCTCTCCCACGAGCTGGACTACGAGACGGCCTCCCACTACCTGCTCAAGGTGGTGGCAGAGGACCGCGGCCAGGCCCCCATGCTCAACGCTTCGGTGTTCGTTAGCGTCGCCGTAGAGGACGTCAATGACCACGCGCCCTGGTTCCCTGGTGACGTGCTGgtgtttggggtggaggagaACCTGCCCGTCAGCACCGCGGTCTACACCTTCAAGGCCAACGACGGGGACGGTAGCTTGGCCAACAGCGTCCTGCGCTACTCCCTCACCTCCAGCAGCCCAACGGAGACCCCCTTCCTCCTGGACCCCCTCACGGGGACCCTCAGCACCGGCGCCACCATCGACCGCGAGGAGGTGGACAGCTGGGTGCTGACCGTGATGGCCACCGACCAGGCGGCGGACCCCCAGAAGCGCCGCCACGCCTCTTTGACCACACGCATCGCCGTGCTGGACCGGAACGACAACGCCCCCAGCTTCGTGTCCGCCAGCGTGGCCCAGGCTGTGGAGGATGCCCGGCCTGGGTCTCTGGTCCACCACGTCATCGCCAGGGACCGGGACTTGGGACAGAACGGCAGGGTGGCCTACAGAATCCTGTCGGGTAACGAGAAGGGAGTCTTCGCCCTGGAGGAAACAACAGGGCTGCTGTCCCTGGCCTCCACTCTGGACTACAAGGTGGACGGCTTCTTCTCTCTGGTCATCCAGGCGCGGGATGGCGGGACCCCCCCACTCTCATCCTCTCAGACACTGCGGGTGACTGTGGTGGACGTGAACGACGAGGCGCCGGTCTTCCAGCAGAGCGTCTACAGAGCCACCGTCCCCGAGAACCAGCCGCCGGGCACGCTGGTGGTCAGGGTGGCAGCGATCGACGGGGACTCGGAGATCAGCACAGCCGCAGCCCTGGACAGAGAGCGGCAGCCTCACTTCACCCTGAGAGTGCTGGGTCGAGATAGCGGAGTCCCGGCCCTCTCCAGCACCGCCACGGTCCTGTGCTCCATCCTGGATGAGAACGACAGCTCCCCCGAGTTCACACTGCCCTCCCTGGTGGTGCGTGTCCCGGAGAACCAGCCGCCCGGCGTCATCCACCTGGCACAGGCCTCTGATGGCGACGCTGGCGAGAACGGCACCCTGGAGTACCGCATCTCAGGTGACGATTTCGGAGGTGGTTTCGTTGTCAATGCCACGACGGGGGCGGTGTCAGTGACCCGGGAGCTGGACCGGGAAGAGCAGGACAACTACACTCTGGTGATCGAGGCCTGGGATGGGGGGGATCCTCGCCGGAGCTCCACGGCCACACTGCTGGTCCATGTGCTCGATGAGAACGACAACAGCCCGACGTTCGGTCGGCAGCAGTACCGCGTGTCGGTCAGCGAGGGGCTGCCGCTGGGGGCAGAGGTGCTGTGGCTCAGCGCTAGTGACCCGGACGAGGGCCCCAACGGTCGCGTGTCCTACTCCCTCACCGGTGACATGCTGGGCACGTTCACCGTGGACAGTGTGTCCGGCCAGGTCAGGACCGCGCGGCCGCTAGACCGGGAGAGCCGGGCCCAGTACGTGTTCCGGGCGGTGGCGATGGACGGCGGCGCGCAAGGCCCCCGCAGCAGCACGGTCAGCGTCATGGTGCACCTGGACGACGTCAACGACAACGCGCCGCAACTCCTGCAGAACCTCGTGCGCGGCTTCCTCTCCGCCCACACCATGCCCAACCAGACCGTGGCCACCGTGCGGGCGGACGACAGTGACCTGGGCCGCAACGGGGAGGTGCTGTTCTGCCTGGCGCAGCCCGACCCCTTGTTCGAAATCCATCCCCGCACTGGGGACGTGTGGCTGAAGAGCCCCCTGCCGCCCGGGTACTACGGCACCAGGCTGCTGCAGGTCATCGCGGCGGACCAGGGTGAGCCAGCGCTGTCCTCCACCGGCCTGGTGCTGCTGCACCTAAGGGGCGAGGAGCCGGCACTGTGGTTCACAGAGACCGAGTACGAAGCCACCATCCCTGAAAACAGCAAAACCGGCTCGCTGGTTGTGACCGTAGCCACTCAGGACCAGGGCTCAGGGAGGAGGGGAGTCAGGTACAGCATCCTCAGCGGCAATGAAGACGGGGCCTTCGCTCTGAATCCTCACACTGgggCCGTGTCGGTGAAGGAGCCGCGCTCTCTGGACTTCGAGCGGAGGAGTCATGTGCACCTGGTGGTCCTGGCCTCTAGCGACTGGGGCACGGCGCACTGCCGGGTGAGCGTGGCGCTGCAGGACGTGGTGGCCACCGATGCCGACACCGGGCCAAACAGACAGCTGGAGTACTCCATCCTGTCGGGGAACGAGAATGACGCCTTCCTGCTCGACTCGGTCAGGGGCATCCTGGCCACCAACGCCATCCTGGACCGCGAGATCGTGCCGTCCTACAGGCTGGTCCTGCAGGCCGTGGACGCAGGGGACCCCCGGCTCACCGGCACCACCACGGTCCGAGTGCAGGTGGTGGACGTCAACGACAACGCGCCGGCCATCCCGCCCATGGAGCCTGCTGAGATCGCCGAGACCAACGACGTGGACCTGGGCTCTACGCTCACCTACCGGTTCTCGGAGGATGGGGACGCCAGGGGCAGGTTTGCCATCGACCGCTACACCGGTGTGGTGACGCTCACCGGCCCACTGGACTACGAGGAGGGCTCTCGGTACCGGCTCCGGGTCCGGGCCTCCGACTCAGTCCACCACACCGAGGCGGACTGCAGCGTCCTGGTGCTCGATGTCAACGACAACCCGCCTGCCTTCTCCCAGGACTCCTACCAGGTGGTCCTCCCAGAACTGACCCCCGAAGACACGTTCGTCCTGGCGCTGACGGCCACGGACAGGGACTCCGGGCTCAACGGGGACATCTCCTACCGGCTGCTGTTGCCCCGGGACAAGGGCTTCTACATCAGCGCGGAAAACGgttCCCTCTACACGGACAAGCCGCTGCGGTTCCTCACCGACAGCAGTGTGGTTCAGCTCCTTGTGGAGGCCAGGGACGGAGGGGACCCCCCGCTGACCGCCGTGACCTCGGTGGAGATACACATCCAGGACGCCAATGACCATGCGCCCCGGTTCCAACAGGCCGCTTACCAGGTCAGTGCCGCGGAGGACACCAGCGTGGGAAGCACCCTGCTGTTCCTGTCCGCCAGCGATGAGGACCGGACCCCCGAGAACGCCTTCCTGGACTACAGCATCGTCAGCGGAAACAAGGAGGGCCGCTTCTGCCTGGAGGTCAGCGCAGTGCCGACGGAGGCCCGGCCGGAGTGCGTTGCCCGGCTGGTTCTGTGCGGCTCTCTGGACCGCGAGACCACGGGCAGCTACACACTGGTCGTCTTGGCTTCGGACCGGGGGGCGCCGGCCCTGAATGGCTCTGTGGTCGTGTCGGTGACCGTGCTGGATGTCAACGACAACGCGCCCGTGTTCGTGAGCCCGGAGTATCGCGTGGAGGCGGGAGAGGGCAGCCCGCAGGGCTCCAGGCTCACGCAGGTGTCGGCCCGGGACGCAGACCTCGGCGCCAACGCGGAGGTGAGGTATGACATCGTCTCCGGCAACAGTAAGGGCCTCTTCCGGCTGGACCACCGTAGTGGCGCCTTGGAGGTGAACCGGAGCCTAGACTATGAGGAGGATGCCTCGTTCACGCTGACGGTGCAGGCGGCCGACGGGGGTCGGGCCAGGGCGGGGAAGGTGGCCTTCGCTGTGATTTATGTCTCCATCCTGGACGAGAACGACAACTCGCCCTACTTCGCCTTCCCCGAGGTGAACTGCTCCATAGTGGAGAACCAGCCAGCCTTCTCCCCCGTCTGTGCCGTGCGGGCGCTGGACGCCGACGCCGGCCCCTTCGGCCAGCTGAGCTACTCTGTCCTGTCGCCCTGCTTCACCGACTACGGCAGCCCCGGCAGGAAGGAGGCCTTCACCATCGACCCGCTCACAGGGGACATCCAGACCCGGCAGGCCTTCGACTACGAGCGTGAGAGCGAGTACTGCCTGGTGGTGCAGGCGGCCGACACGGGCGATCAGACGGCCACGGTGAGGGTCCGCATCCACATCGAGGGCGTCGATGAGTTCAGCCCCGTCTTCACTCAGGACCTGTATCAGTTCGAGCTGCCAGAGAAGTCGGAGGTGGGCCAGAGCGTGGGCCGGGTCGAGGCCACAGACAGCGATGCCGGGCTGGACGGGGCGCTGCTGTTCTCCCTGGCAGAGCCCTCCCTGTTCTTCGCAGTCAACAGGACCAGCGGGGCGATCTATGTGTCCGGCCTGGTGTACCGGCGGAGAGGCAGTCTGAGGAGCAGAGAGGACCTGGTGGAGCTCCTGGTCAGGGTCAGCAGCCCCAAGCCGGACTCCAAATCCACCACCTGCCTGGTGGCTGTGAATGTGTCAAGCTCGGTGGCCGAGGCTTTCACCGGGATGCCCTTCAGCATTCTGAGCATCAGCCTGGGCGTCTCCCTCCTCGTCTTCCTCCTGCTGGTCATCAGCCTGGTGGGGCTCATCCTTAGGTACCGCAGGAAAGATGTCCAGGTCCAGAAGGGGGCCCTGCAGCCCCTGGCAGCCAGCTTGAACCCCAGCACCGACACCTTGAACGGGGCGGGCGGCCATGGCGCCATCGGCCTGCAGGACCTGCGACTCTGCAACAAGAAAGAGGCGGCAAACCTCTGCCGGCACTCGGACTCCAGCGGCCGGGGGTCCGCCGAGGGGGACACGGCTGAGGACGAGGAGATCCAGATGATCAACGAGCATCCCTGTGGAAAACGCTCGGGCTCAGAGCTCAGCGAACGGGCGTCCAGGGTCCCGGACTCTGGCATCCCCCGTGACTCCGACCAGCTGTCCTGCCAGTCTGAGGAAGAGCCAGACCCGAGCGGGGATGTCCCAGCCACAGCTGCCGGCACCGCGAGCTCAGAGAGCCTGCATACCTTCagggaggagggtgggggggaggggatgcTGACGAGGGGCGCAGCGCAGGCGAGGGACGCCGTCATCACGGATGGGCCCGGCCTGTACGCCTTCCAGGGCGGCCAGGTGGCGTCGGGCGGCTCGCTGGCGTCTCTGGTGTGCACCGAGGAGGAGCTGAGGGGCAGCTACAGCTGGGACTACCTGCTGCACTGGGAGCCCACCTTCCAGCCGCTGGCCTCGGTGTTCAGTGACATCGGCCAGCTGCAGGACGAAGCCTCGCAGAAGCGCAACTTCCCAAAGGAAAGCCGGGGCCTCATCTACCCACCTCCGCTGATCACCGCCGTGGCCCAGCCTGGCATCAGGGCCGTGCCCCCCCGCATGCCCACCCTGACTGGCCGGCCCCCTTTCCCCAAGTACGCTCACTCGCCCCTCGGCGGGAACTCGGGCCTCACCCCCACAGCCATGACCCCCAGCTTCTCGCCCTCGCTGTCCCTGCTCACACTGCGGACCCCCACGGCCTCCCCGGTCGTGTCCGAGGCGGGGCTGGGCGCCCCCCCGCAAGTGGCCCCCTTCCACCCCTTCATGGTCCGAGAGGGAGAGATGCAGGTGTAG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
K16507 DCHS1_2, PCDH16_23; protocadherin-16/23

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015991 True 9648 mRNA 0.67 20 32639771 32676388

Neighbor

gene id symbol gene type direction distance location
AMCG00015990 sfrp2,LOC106602749 coding downstream 35932 32600823 ~ 32603839 (-)
AMCG00015989 NA coding downstream 41066 32586700 ~ 32598705 (-)
AMCG00015987 LOC105030636 coding downstream 132291 32499211 ~ 32507480 (-)
AMCG00015983 tdo2 coding downstream 239678 32395174 ~ 32400093 (-)
AMCG00015975 glrb coding downstream 389273 32229546 ~ 32250498 (-)
AMCG00015997 plrg1,LOC107757621,LOC107695461 coding upstream 6027 32682415 ~ 32689889 (-)
AMCG00016000 NA coding upstream 28449 32704837 ~ 32705938 (-)
AMCG00015998 NA coding upstream 32860 32709248 ~ 32714322 (-)
AMCG00015999 NA coding upstream 42838 32719226 ~ 32723542 (-)
AMCG00016005 NA coding upstream 85448 32761836 ~ 32772613 (-)
G102149 NA non-coding downstream 109177 32530271 ~ 32530594 (-)
G102092 NA non-coding downstream 276908 32362463 ~ 32362863 (-)
G102020 NA non-coding downstream 686123 31952908 ~ 31953648 (-)
G101996 NA non-coding downstream 815075 31824435 ~ 31824696 (-)
G101911 NA non-coding downstream 1668884 30892328 ~ 30970887 (-)
G102237 NA non-coding upstream 21639 32698027 ~ 32698376 (-)
G102261 NA non-coding upstream 119717 32796105 ~ 32796333 (-)
G102281 NA non-coding upstream 220427 32896815 ~ 32897014 (-)
G102302 NA non-coding upstream 267791 32944179 ~ 32944499 (-)
AMCG00015985 gucy1a3 other downstream 182893 32449500 ~ 32456878 (-)
AMCG00015984 gucy1b3,gucy1a3,LOC107572203 other downstream 192806 32423128 ~ 32446965 (-)
AMCG00015979 NA other downstream 249759 32386913 ~ 32390012 (-)
AMCG00015965 NA other downstream 669484 31954646 ~ 31970287 (-)
G102017 rapgef2,LOC102783712 other downstream 694596 31908489 ~ 31945175 (-)
AMCG00016006 NA other upstream 232788 32909176 ~ 32938058 (-)

Expression


Co-expression Network