Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016000 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 32704837 ~ 32705938 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016000 | True | 438 | mRNA | 0.58 | 2 | 32704837 | 32705938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015997 | plrg1,LOC107757621,LOC107695461 | coding | downstream | 14948 | 32682415 ~ 32689889 (-) |
| AMCG00015991 | NA | coding | downstream | 28449 | 32639771 ~ 32676388 (-) |
| AMCG00015990 | sfrp2,LOC106602749 | coding | downstream | 100998 | 32600823 ~ 32603839 (-) |
| AMCG00015989 | NA | coding | downstream | 106132 | 32586700 ~ 32598705 (-) |
| AMCG00015987 | LOC105030636 | coding | downstream | 197357 | 32499211 ~ 32507480 (-) |
| AMCG00015998 | NA | coding | upstream | 3310 | 32709248 ~ 32714322 (-) |
| AMCG00015999 | NA | coding | upstream | 13288 | 32719226 ~ 32723542 (-) |
| AMCG00016005 | NA | coding | upstream | 55898 | 32761836 ~ 32772613 (-) |
| AMCG00016002 | NA | coding | upstream | 99742 | 32805680 ~ 32823381 (-) |
| AMCG00016001 | NA | coding | upstream | 130515 | 32836453 ~ 32840215 (-) |
| G102237 | NA | non-coding | downstream | 6461 | 32698027 ~ 32698376 (-) |
| G102234 | NA | non-coding | downstream | 23506 | 32664772 ~ 32681331 (-) |
| G102149 | NA | non-coding | downstream | 174243 | 32530271 ~ 32530594 (-) |
| G102092 | NA | non-coding | downstream | 341974 | 32362463 ~ 32362863 (-) |
| G102020 | NA | non-coding | downstream | 751189 | 31952908 ~ 31953648 (-) |
| G102261 | NA | non-coding | upstream | 90167 | 32796105 ~ 32796333 (-) |
| G102281 | NA | non-coding | upstream | 190877 | 32896815 ~ 32897014 (-) |
| G102302 | NA | non-coding | upstream | 238241 | 32944179 ~ 32944499 (-) |
| AMCG00015985 | gucy1a3 | other | downstream | 247959 | 32449500 ~ 32456878 (-) |
| AMCG00015984 | gucy1b3,gucy1a3,LOC107572203 | other | downstream | 257872 | 32423128 ~ 32446965 (-) |
| AMCG00015979 | NA | other | downstream | 314825 | 32386913 ~ 32390012 (-) |
| AMCG00015965 | NA | other | downstream | 734550 | 31954646 ~ 31970287 (-) |
| G102017 | rapgef2,LOC102783712 | other | downstream | 759662 | 31908489 ~ 31945175 (-) |
| AMCG00016006 | NA | other | upstream | 203238 | 32909176 ~ 32938058 (-) |
