Gene
RNA
| Item | Value |
|---|---|
| gene id | G99997 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 18144276 ~ 18144517 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU124906 | True | 242 | lncRNA | 0.32 | 1 | 18144276 | 18144517 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015720 | LOC107565324 | coding | downstream | 22515 | 18102674 ~ 18121761 (-) |
| AMCG00015719 | NA | coding | downstream | 71558 | 18071300 ~ 18072718 (-) |
| AMCG00015718 | NA | coding | downstream | 88361 | 18047191 ~ 18055915 (-) |
| AMCG00015717 | NA | coding | downstream | 115306 | 17971120 ~ 18028970 (-) |
| AMCG00015713 | NA | coding | downstream | 596780 | 17523279 ~ 17547496 (-) |
| AMCG00015721 | pou4f2,LOC102790387 | coding | upstream | 292666 | 18437183 ~ 18437479 (-) |
| AMCG00015722 | pou4f2,LOC107550641,LOC101063993,LOC107670704,LOC102237073,LOC107742546 | coding | upstream | 293223 | 18437740 ~ 18439149 (-) |
| AMCG00015724 | NA | coding | upstream | 456715 | 18601232 ~ 18617687 (-) |
| AMCG00015729 | mmaa,LOC106610208,LOC107550599 | coding | upstream | 595543 | 18740060 ~ 18770335 (-) |
| AMCG00015730 | smad1,LOC105020940,LOC106610220 | coding | upstream | 630843 | 18775360 ~ 18783878 (-) |
| G99944 | NA | non-coding | downstream | 186789 | 17952758 ~ 17957487 (-) |
| G99942 | NA | non-coding | downstream | 210948 | 17933000 ~ 17933328 (-) |
| G99941 | NA | non-coding | downstream | 238820 | 17905037 ~ 17905456 (-) |
| G99937 | NA | non-coding | downstream | 340357 | 17802158 ~ 17803919 (-) |
| G99936 | NA | non-coding | downstream | 344779 | 17797309 ~ 17799497 (-) |
| G100019 | LOC103376870 | non-coding | upstream | 200717 | 18345234 ~ 18399021 (-) |
| G100038 | LOC100136012 | non-coding | upstream | 371934 | 18516451 ~ 18516729 (-) |
| G100039 | NA | non-coding | upstream | 416198 | 18560715 ~ 18560947 (-) |
| G100040 | NA | non-coding | upstream | 446935 | 18591452 ~ 18598196 (-) |
| G100102 | NA | non-coding | upstream | 591939 | 18736456 ~ 18737039 (-) |
| G99939 | NA | other | downstream | 306334 | 17837580 ~ 17837942 (-) |
| AMCG00015694 | NA | other | downstream | 1532832 | 16592228 ~ 16611444 (-) |
| AMCG00015691 | NA | other | downstream | 1608808 | 16524114 ~ 16535468 (-) |
| AMCG00015681 | NA | other | downstream | 1671099 | 16467299 ~ 16473177 (-) |
| G99646 | NA | other | downstream | 1922121 | 16221765 ~ 16222155 (-) |
| AMCG00015723 | lsm6,LOC106610200 | other | upstream | 483088 | 18627605 ~ 18630665 (-) |
| AMCG00015752 | NA | other | upstream | 1830439 | 19974956 ~ 19981557 (-) |
| AMCG00015761 | herc3 | other | upstream | 2082850 | 20227367 ~ 20279644 (-) |
| AMCG00015800 | NA | other | upstream | 4536177 | 22680694 ~ 22702249 (-) |
| AMCG00015825 | LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 | other | upstream | 5599273 | 23743790 ~ 23746703 (-) |
