G100102


Basic Information

Item Value
gene id G100102
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 18736456 ~ 18737039 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125050
aggcgaaagggggtcaaacacagtattagtatggtgtttctaataatcctttataATCTTATACATttcatacttatttatttattagggtAAAAAGTGGATGAGTCTTCATTTGCATTCCTGCTCTTCTGGATGGGGTGACTAGTCCACTGTATTTTCTACAACCTTTTTGTAATACAATGGGAAGGACTCttgactttctttttatttagaaataatgtGTGTGGAACAGTTACTACCTGGAAAGGTATGATCGCTTCAGATACATTGTGAAAACAATCACCAGAACAGAGTGGAAAGGTTTATCACCAGGCTTTCTTATAATGaacatattataatgtaatcaATTTCAAATGGGTGCACAGGGTTGAATTGTGAGTACAGTAATCAAATCTTATTCAGATTGTAAACAACATCTTTTTGGTTGTTGAAGATGTTCTTTGTTTGAGATATACTCTTATCACAGAGTCGACACTCCTATCCAACACTAATTAGCAGTGTTGTCTAGGATCGAACATATCGTAAACAGAATTGTTTTTCTTGGATTAAACGTCTTATGACAAAGAATCCTTGCTTGTGGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125050 True 584 lncRNA 0.35 1 18736456 18737039

Neighbor

gene id symbol gene type direction distance location
AMCG00015724 NA coding downstream 118769 18601232 ~ 18617687 (-)
AMCG00015722 pou4f2,LOC107550641,LOC101063993,LOC107670704,LOC102237073,LOC107742546 coding downstream 297307 18437740 ~ 18439149 (-)
AMCG00015721 pou4f2,LOC102790387 coding downstream 298977 18437183 ~ 18437479 (-)
AMCG00015720 LOC107565324 coding downstream 614695 18102674 ~ 18121761 (-)
AMCG00015719 NA coding downstream 663738 18071300 ~ 18072718 (-)
AMCG00015729 mmaa,LOC106610208,LOC107550599 coding upstream 3021 18740060 ~ 18770335 (-)
AMCG00015730 smad1,LOC105020940,LOC106610220 coding upstream 38321 18775360 ~ 18783878 (-)
AMCG00015732 abce1 coding upstream 93028 18830067 ~ 18839249 (-)
AMCG00015733 NA coding upstream 123222 18860261 ~ 18862808 (-)
AMCG00015735 LOC106602344 coding upstream 139449 18876488 ~ 18919607 (-)
G100040 NA non-coding downstream 138260 18591452 ~ 18598196 (-)
G100039 NA non-coding downstream 175509 18560715 ~ 18560947 (-)
G100038 LOC100136012 non-coding downstream 219727 18516451 ~ 18516729 (-)
G100019 LOC103376870 non-coding downstream 337435 18345234 ~ 18399021 (-)
G99997 NA non-coding downstream 591939 18144276 ~ 18144517 (-)
G100109 NA non-coding upstream 62531 18799570 ~ 18806676 (-)
G100185 NA non-coding upstream 395321 19132360 ~ 19132566 (-)
G100218 NA non-coding upstream 888021 19625060 ~ 19699829 (-)
G100222 NA non-coding upstream 934703 19671742 ~ 19701459 (-)
G100233 NA non-coding upstream 975888 19712927 ~ 19713216 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 105791 18627605 ~ 18630665 (-)
G99939 NA other downstream 898514 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 2125012 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 2200988 16524114 ~ 16535468 (-)
AMCG00015681 NA other downstream 2263279 16467299 ~ 16473177 (-)
AMCG00015752 NA other upstream 1237917 19974956 ~ 19981557 (-)
AMCG00015761 herc3 other upstream 1490328 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 3943655 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 5006751 23743790 ~ 23746703 (-)
G101067 NA other upstream 6255914 24992953 ~ 25000890 (-)

Expression


Co-expression Network