Gene
RNA
| Item | Value |
|---|---|
| gene id | G100109 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 18799570 ~ 18806676 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125060 | True | 397 | lncRNA | 0.46 | 2 | 18799570 | 18806676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015730 | smad1,LOC105020940,LOC106610220 | coding | downstream | 15692 | 18775360 ~ 18783878 (-) |
| AMCG00015729 | mmaa,LOC106610208,LOC107550599 | coding | downstream | 29235 | 18740060 ~ 18770335 (-) |
| AMCG00015724 | NA | coding | downstream | 181883 | 18601232 ~ 18617687 (-) |
| AMCG00015722 | pou4f2,LOC107550641,LOC101063993,LOC107670704,LOC102237073,LOC107742546 | coding | downstream | 360421 | 18437740 ~ 18439149 (-) |
| AMCG00015721 | pou4f2,LOC102790387 | coding | downstream | 362091 | 18437183 ~ 18437479 (-) |
| AMCG00015732 | abce1 | coding | upstream | 23391 | 18830067 ~ 18839249 (-) |
| AMCG00015733 | NA | coding | upstream | 53585 | 18860261 ~ 18862808 (-) |
| AMCG00015735 | LOC106602344 | coding | upstream | 69812 | 18876488 ~ 18919607 (-) |
| AMCG00015738 | smarca5,LOC107703846 | coding | upstream | 304140 | 19110816 ~ 19125482 (-) |
| AMCG00015739 | NA | coding | upstream | 326133 | 19132809 ~ 19154312 (-) |
| G100102 | NA | non-coding | downstream | 62531 | 18736456 ~ 18737039 (-) |
| G100040 | NA | non-coding | downstream | 201374 | 18591452 ~ 18598196 (-) |
| G100039 | NA | non-coding | downstream | 238623 | 18560715 ~ 18560947 (-) |
| G100038 | LOC100136012 | non-coding | downstream | 282841 | 18516451 ~ 18516729 (-) |
| G100019 | LOC103376870 | non-coding | downstream | 400549 | 18345234 ~ 18399021 (-) |
| G100185 | NA | non-coding | upstream | 325684 | 19132360 ~ 19132566 (-) |
| G100218 | NA | non-coding | upstream | 818384 | 19625060 ~ 19699829 (-) |
| G100222 | NA | non-coding | upstream | 865066 | 19671742 ~ 19701459 (-) |
| G100233 | NA | non-coding | upstream | 906251 | 19712927 ~ 19713216 (-) |
| G100257 | LOC104962440 | non-coding | upstream | 914992 | 19721668 ~ 19740201 (-) |
| AMCG00015723 | lsm6,LOC106610200 | other | downstream | 168905 | 18627605 ~ 18630665 (-) |
| G99939 | NA | other | downstream | 961628 | 17837580 ~ 17837942 (-) |
| AMCG00015694 | NA | other | downstream | 2188126 | 16592228 ~ 16611444 (-) |
| AMCG00015691 | NA | other | downstream | 2264102 | 16524114 ~ 16535468 (-) |
| AMCG00015681 | NA | other | downstream | 2326393 | 16467299 ~ 16473177 (-) |
| AMCG00015752 | NA | other | upstream | 1168280 | 19974956 ~ 19981557 (-) |
| AMCG00015761 | herc3 | other | upstream | 1420691 | 20227367 ~ 20279644 (-) |
| AMCG00015800 | NA | other | upstream | 3874018 | 22680694 ~ 22702249 (-) |
| AMCG00015825 | LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 | other | upstream | 4937114 | 23743790 ~ 23746703 (-) |
| G101067 | NA | other | upstream | 6186277 | 24992953 ~ 25000890 (-) |
