G100684


Basic Information

Item Value
gene id G100684
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 22720938 ~ 22721365 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125751
ttaaaggtGAAGACAGTCAGTGTCACACGGTGGTGAAAAGTCCATTATGAAGCACTGCGAAACAGATTATATTTCCAGAGTCATTTTCTCCCAAGCAGCTTTGAGCAGCCTGTTCAGAAGCTCAGCTCATTAGTCAACTTTGCAAACAGTCTGTGTGATctcaaaacaaaagagaatCGTGCATAATTCACTGCCATAGCATATGCaacggaaaaaaaaactgcacacgGACACAAGTGACTCCTTCTAGATGCACAGTTTGTAACTCCTGCAAATGCACTTAGATAGATAGCAAAAGTAAGGGCTGTGAGTGTAGGTTACAGCGCGCCACCTACAGAGACTGCTGTCAATGACGGGTTTCTGCTCCTTCGTCTAGCAGAATAGTGACTGCCTGTACCACAGAGAATCCAACAACAGACAATCTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125751 True 428 lncRNA 0.44 1 22720938 22721365

Neighbor

gene id symbol gene type direction distance location
AMCG00015799 hspa12b,LOC102781497,LOC107098312 coding downstream 42185 22671903 ~ 22678753 (-)
AMCG00015798 hspa12b,LOC106578073,LOC102781497 coding downstream 49536 22667757 ~ 22671402 (-)
AMCG00015793 NA coding downstream 61217 22657674 ~ 22659721 (-)
AMCG00015792 exoc6b,LOC107562050,LOC107668338,LOC107750632,LOC107588190 coding downstream 84992 22622744 ~ 22635946 (-)
AMCG00015791 exoc6b,LOC107562050,LOC107668338 coding downstream 121276 22570736 ~ 22599662 (-)
AMCG00015803 NA coding upstream 116 22721481 ~ 22725963 (-)
AMCG00015802 NA coding upstream 8991 22730356 ~ 22736551 (-)
AMCG00015804 NA coding upstream 49340 22770705 ~ 22780038 (-)
AMCG00015805 NA coding upstream 71336 22792701 ~ 22793900 (-)
AMCG00015809 NA coding upstream 160622 22881987 ~ 22886388 (-)
G100680 paip2b,LOC103027680,LOC107551309,LOC108263850,LOC107674237 non-coding downstream 5979 22712783 ~ 22714959 (-)
G100636 NA non-coding downstream 527629 22192976 ~ 22193309 (-)
G100567 NA non-coding downstream 927350 21793342 ~ 21793588 (-)
G100566 NA non-coding downstream 932036 21788696 ~ 21788902 (-)
G100555 NA non-coding downstream 1211451 21447151 ~ 21509487 (-)
G100703 NA non-coding upstream 95572 22816937 ~ 22817413 (-)
G100733 NA non-coding upstream 113888 22835253 ~ 22923407 (-)
G100754 NA non-coding upstream 258457 22979822 ~ 22983984 (-)
G100780 NA non-coding upstream 435764 23157129 ~ 23215066 (-)
G100815 NA non-coding upstream 600680 23322045 ~ 23322253 (-)
AMCG00015800 NA other downstream 18689 22680694 ~ 22702249 (-)
AMCG00015761 herc3 other downstream 2441294 20227367 ~ 20279644 (-)
AMCG00015752 NA other downstream 2739381 19974956 ~ 19981557 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 4090273 18627605 ~ 18630665 (-)
G99939 NA other downstream 4882996 17837580 ~ 17837942 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 1022425 23743790 ~ 23746703 (-)
G101067 NA other upstream 2271588 24992953 ~ 25000890 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 5265390 27986755 ~ 27997677 (-)
AMCG00015891 wdr17 other upstream 5320198 28041563 ~ 28069876 (-)
G101456 NA other upstream 5440472 28161837 ~ 28257732 (-)

Expression


Co-expression Network