G100636


Basic Information

Item Value
gene id G100636
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 22192976 ~ 22193309 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125692
taacactgataatctcgttatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatttgttagaagcaggaaaaaagggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtccgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125692 True 334 lncRNA 0.51 1 22192976 22193309

Neighbor

gene id symbol gene type direction distance location
AMCG00015784 LOC104960468 coding downstream 217184 21964786 ~ 21975792 (-)
AMCG00015783 NA coding downstream 236822 21952114 ~ 21956154 (-)
AMCG00015785 NA coding downstream 838685 21326081 ~ 21354291 (-)
AMCG00015780 NA coding downstream 1099114 21061994 ~ 21093862 (-)
AMCG00015778 slc4a11 coding downstream 1217596 20948137 ~ 20975380 (-)
AMCG00015789 LOC105895513,LOC106523830,LOC103156770,LOC108249672,LOC103480607,LOC101076120,LOC103388995 coding upstream 255944 22449253 ~ 22471204 (-)
AMCG00015790 exoc6b,LOC105895564,LOC106560516 coding upstream 313697 22507006 ~ 22513164 (-)
AMCG00015791 exoc6b,LOC107562050,LOC107668338 coding upstream 377427 22570736 ~ 22599662 (-)
AMCG00015792 exoc6b,LOC107562050,LOC107668338,LOC107750632,LOC107588190 coding upstream 429435 22622744 ~ 22635946 (-)
AMCG00015793 NA coding upstream 464365 22657674 ~ 22659721 (-)
G100567 NA non-coding downstream 399388 21793342 ~ 21793588 (-)
G100566 NA non-coding downstream 404074 21788696 ~ 21788902 (-)
G100555 NA non-coding downstream 683489 21447151 ~ 21509487 (-)
G100554 NA non-coding downstream 689987 21418675 ~ 21502989 (-)
G100556 NA non-coding downstream 735683 21451069 ~ 21457293 (-)
G100680 paip2b,LOC103027680,LOC107551309,LOC108263850,LOC107674237 non-coding upstream 519474 22712783 ~ 22714959 (-)
G100684 NA non-coding upstream 527629 22720938 ~ 22721365 (-)
G100703 NA non-coding upstream 623628 22816937 ~ 22817413 (-)
G100733 NA non-coding upstream 641944 22835253 ~ 22923407 (-)
G100754 NA non-coding upstream 786513 22979822 ~ 22983984 (-)
AMCG00015761 herc3 other downstream 1913332 20227367 ~ 20279644 (-)
AMCG00015752 NA other downstream 2211419 19974956 ~ 19981557 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 3562311 18627605 ~ 18630665 (-)
G99939 NA other downstream 4355034 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 5581532 16592228 ~ 16611444 (-)
AMCG00015800 NA other upstream 487385 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 1550481 23743790 ~ 23746703 (-)
G101067 NA other upstream 2799644 24992953 ~ 25000890 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 5793446 27986755 ~ 27997677 (-)
AMCG00015891 wdr17 other upstream 5848254 28041563 ~ 28069876 (-)

Expression


Co-expression Network