G12330


Basic Information

Item Value
gene id G12330
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13546399 ~ 13546598 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU15214
CTGGATGCTCTGCACTGCGGAGCTGGTCTCATCTCCCACCGCATTAGTGAACTCCGCCCCTTTGCTGGAGAAGTCTGAGTACGCGGGGTCGTCGGGGTCAGGGAGCTCCACCTCTTCCACgtgcttctgtttctttttgggTGGCTTGGAGGCCCGGGGGGGTTTCTCCACTGAGAGCTCCTCCTTCTCCTGAGCCAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15214 True 200 lncRNA 0.43 1 13546399 13546598

Neighbor

gene id symbol gene type direction distance location
AMCG00016242 NA coding upstream 90483 13445038 ~ 13455916 (+)
AMCG00016239 usp25,LOC107653727 coding upstream 299383 13212058 ~ 13247016 (+)
AMCG00016240 NA coding upstream 358006 13185034 ~ 13188393 (+)
AMCG00016231 NA coding upstream 482891 13037182 ~ 13063508 (+)
AMCG00016237 NA coding upstream 525198 13020983 ~ 13021201 (+)
AMCG00016249 atg101,LOC107751375,LOC107686213,LOC107589731 coding downstream 36446 13583044 ~ 13588973 (+)
AMCG00016250 NA coding downstream 51236 13597834 ~ 13617644 (+)
AMCG00016256 NA coding downstream 130396 13676994 ~ 13705883 (+)
AMCG00016255 uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 coding downstream 160616 13707214 ~ 13714691 (+)
AMCG00016254 uvrag,LOC106603537,LOC106567946 coding downstream 179773 13726371 ~ 13742178 (+)
G12289 NA non-coding upstream 72614 13473488 ~ 13473785 (+)
G12214 NA non-coding upstream 445816 13042242 ~ 13100583 (+)
G12220 NA non-coding upstream 472647 13071571 ~ 13073752 (+)
G12217 NA non-coding upstream 480461 13065219 ~ 13065938 (+)
G12209 serpinh1b,LOC106613072,LOC107666206,LOC107588392,LOC107756564,LOC106581278 non-coding upstream 566883 12978278 ~ 12979516 (+)
G12331 NA non-coding downstream 4996 13551594 ~ 13551858 (+)
G12347 NA non-coding downstream 91704 13638302 ~ 13639588 (+)
G12368 NA non-coding downstream 110795 13657393 ~ 13659659 (+)
G12406 NA non-coding downstream 283136 13829734 ~ 13830887 (+)
G12487 NA non-coding downstream 636007 14182605 ~ 14184686 (+)
AMCG00016241 NA other upstream 156763 13271584 ~ 13389636 (+)
AMCG00016221 NA other upstream 759500 12778224 ~ 12786899 (+)
AMCG00016213 NA other upstream 1085134 12435136 ~ 12461265 (+)
AMCG00016202 NA other upstream 1540447 11992972 ~ 12005952 (+)
G11921 NA other upstream 1674664 11868825 ~ 11871735 (+)
G12348 NA other downstream 75281 13621879 ~ 13627711 (+)
G12349 NA other downstream 84687 13631285 ~ 13631797 (+)
G12351 NA other downstream 88844 13635442 ~ 13637001 (+)
G12587 NA other downstream 891173 14437771 ~ 14438606 (+)
AMCG00016288 NA other downstream 1198718 14745316 ~ 14783535 (+)

Expression


Co-expression Network