Gene
RNA
| Item | Value |
|---|---|
| gene id | G12347 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 13638302 ~ 13639588 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU15231 | False | 375 | lncRNA | 0.49 | 3 | 13638302 | 13639588 |
| TU15232 | True | 520 | lncRNA | 0.41 | 2 | 13638302 | 13639150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016250 | NA | coding | upstream | 20658 | 13597834 ~ 13617644 (+) |
| AMCG00016249 | atg101,LOC107751375,LOC107686213,LOC107589731 | coding | upstream | 49329 | 13583044 ~ 13588973 (+) |
| AMCG00016242 | NA | coding | upstream | 182386 | 13445038 ~ 13455916 (+) |
| AMCG00016239 | usp25,LOC107653727 | coding | upstream | 391286 | 13212058 ~ 13247016 (+) |
| AMCG00016240 | NA | coding | upstream | 449909 | 13185034 ~ 13188393 (+) |
| AMCG00016256 | NA | coding | downstream | 37406 | 13676994 ~ 13705883 (+) |
| AMCG00016255 | uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 | coding | downstream | 67626 | 13707214 ~ 13714691 (+) |
| AMCG00016254 | uvrag,LOC106603537,LOC106567946 | coding | downstream | 86783 | 13726371 ~ 13742178 (+) |
| AMCG00016253 | NA | coding | downstream | 136934 | 13776522 ~ 13783628 (+) |
| AMCG00016260 | emsy | coding | downstream | 241218 | 13880806 ~ 13895173 (+) |
| G12331 | NA | non-coding | upstream | 86444 | 13551594 ~ 13551858 (+) |
| G12330 | NA | non-coding | upstream | 91704 | 13546399 ~ 13546598 (+) |
| G12289 | NA | non-coding | upstream | 164517 | 13473488 ~ 13473785 (+) |
| G12214 | NA | non-coding | upstream | 537719 | 13042242 ~ 13100583 (+) |
| G12368 | NA | non-coding | downstream | 17805 | 13657393 ~ 13659659 (+) |
| G12406 | NA | non-coding | downstream | 190146 | 13829734 ~ 13830887 (+) |
| G12487 | NA | non-coding | downstream | 543017 | 14182605 ~ 14184686 (+) |
| G12489 | dyrk1a,LOC107744208 | non-coding | downstream | 555347 | 14194935 ~ 14196634 (+) |
| G12549 | NA | non-coding | downstream | 744317 | 14383905 ~ 14384657 (+) |
| G12351 | NA | other | upstream | 1301 | 13635442 ~ 13637001 (+) |
| G12349 | NA | other | upstream | 6505 | 13631285 ~ 13631797 (+) |
| G12348 | NA | other | upstream | 10591 | 13621879 ~ 13627711 (+) |
| AMCG00016241 | NA | other | upstream | 248666 | 13271584 ~ 13389636 (+) |
| AMCG00016221 | NA | other | upstream | 851403 | 12778224 ~ 12786899 (+) |
| G12587 | NA | other | downstream | 798183 | 14437771 ~ 14438606 (+) |
| AMCG00016288 | NA | other | downstream | 1105728 | 14745316 ~ 14783535 (+) |
| AMCG00016329 | NA | other | downstream | 2844767 | 16484355 ~ 16486003 (+) |
| G13012 | NA | other | downstream | 3477205 | 17116793 ~ 17121932 (+) |
| AMCG00016379 | cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 | other | downstream | 3922830 | 17562418 ~ 17599581 (+) |
