AMCG00016256


Basic Information

Item Value
gene id AMCG00016256
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13676994 ~ 13705883 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016256
CAATCAATCTGTACATCAAAGCATTGCAAAATACGTCTGCAGCAGAAGCAGCCAGGGCGACTGAACTCCGTCTTTTCGGCTGAGAGCGGTGTTGCCCCTCCACTCCAACCACAGACCACCATGAAGGTTGAATTTGCTCCAGCGAAAATCCCCTTCACCCGGAGACTGCAGACTGCTGCGGTGCTGCAGTGGGTGTTCACCTTCCTCGCCCTCGcgcagtgctgctgtgtgctgttCATTGCCCTGCTCTTCACCCGTTTCTGGCTGATCAGTGTTTTGTATGCCACCTGGTGGTTCATTGACCGTGACACACCATCGCATGGAGGCCGGCGGCTCAGTTTCATGCACAAATTGCCCATGTGGAGGTACCTGCGGGATTACTTTCCTGTCAAGCTGGTGAAGACAGCCAATCTGGATCCAGGGAAGAACTACGTGTTTGGGTTCCACCCCCATGGGATCCTGGTGGCCGGGGCCTTCGTGAACTTCTGTACCCTGACCACCGGCTTCATGCAGCTCTATCCCGGGCTGACCCCTCACCTTCTCATGCTGCCACTGTGGTTCAGAGTGCCCTTCTTCAGAGACTACATCATGTCTGGAGGGCTGATCCCCTCAGACAAGGAGAGCGCCCGGTACCTACTCCAGCGTCAGGAGGGGGGCAATGCGGTGGTCATCGCAGTGGGAGGGGCTCCAGAGGCCCTAGACGCCCATCCAGGGGCCTTCACCGTGCTTCTGGCCAACAGGAAGGGCTTTGTCAAGCTTGCAATAGAGAACGGGGCCCCACTGGTGCCGGTGTTTTCCTTCGGGGAGAATGAGGTGTTCGACCAGGTGGAGAACCCACGGGGGACCTGGCTACGTTGGGTACAGGAGCGTCTGCAGAAGCTGATGGGTGTGTCGTTGCCACTCTTTCATGCTCGAGGTGTCTTCCAGTACAGTTTTGGCCTCATCCCCTACAGGAAGCCCATCTTCACAGTGGTTGCATCCCACGCTTCAGTCATGAAGACCATAATCGCTGCCTATTCCGGCGTGCTGCGAGGGACTGGCTCCAGTATCCTGTCTGCCCTGCAGGACCTACCCTCCGCCCCATGGCTGTCGCGCTCCAAAGTGGAGAGGCATCTGCAGATGATCTCGGTGATGCAGTGGGTCCTCACCTTCCTCATCATGGGTATTGCGTGCACAGTGGCCCTGATGTACTTGTTCTGGACAGACTTGTGGCTGATTGCTGCGACCTACACTGCATGGCTGATCTTTGACTGGAATACGCCAAAACAAGGCAAGCTGCTCAACACAAACATCCGTACAGAACTGGTTCAACAGACTTTTAAGTCCATGCATAGTACAGGTCCTTACAGTGCTGAGAACAACAAGCACAGGGGGAGAAGATCGTCCTGGGTCAGGAACTGGACGGTGTGGAGATATTTCAGGGACTATTTTCCTGTCAGGCTGATTAAAACGCACCCCCTGCTGCCCAGCAGGAATTACATCTTTGGGTACCATCCCCATGGCATCATGTGTTTTGGAGCATTCTGCAATTTTGGGACAGAAGCCACCGGCTTCTCCAAGAAGTTCCCTGGTATTCGGCCTTACCTGGCCACTCTGGATGGAAATTTCCGGATGCCAGTGCTGAGAGAGTACTTAATGTCTGGAGGTATCTGCCCAGTGAATCGTGACACTATTGACTTCATTCTGTCCAGGAATGGAACGGGCAATGCAGTAGTCATCGTTGTCGGGGGAGCCGCAGAGTCTCTGGACTGTGCTCCGGGTGTGAACGCCGTCACCCTGAAGAATCGCAAAGGATTTGTGAAGCTGGCTCTGCAGCAGGGTGCCGACCTGGTGCCTGTGTATTCATTTGGAGAGAATGAGGTCTACAAGCAGCTCATTTTTGAGAAGGACTCCTGGGGGAGACTAATCCAGAGAAAGATCCAGAAACTTCTGGGTTTTGCCCCCTGTTTGTTCCATGGATGTGGCCTGTTCTCTGATGACACTTGGGGCATAGTGCCATACTCCAAACCCATCAACACCGTGGtcgGAGAACCCATCACCGTCCCCAGGATCGAAAAGCCGACCGAGGAGCAGGTCGGTCAGTATCACGACATGTATATCAACTCCCTGCTGAAGCTCTTTGAAAAGAACAAGACCAAATTCGGCCTGCTGGAGAGTGATGTCCTGCACGTCCACTGAAGATCCTGAAATCTCGTGTGGATCGGCTCGGTTTCACCCCTGGACAAGTGCCTGGCTCTGAGATTGGCTCTGGATCGATTGTATTTATATACCCCATACTTACAGTATCATTCCAAAAATGTAGCAAACAATTGCAAGTTTTGGGTGACGACTTAATTGGTGTAtgatgcttttttgttttttgtggagaaCATTTGCATACTGTGTATAGCTTATGTGAATGTACAAAACGAGGTTGGCTTTGAGCTCTCGTAGACGCTGGTTTCATTAATCCAGTCTGAAAAGTATCCTACAATTCAAAAATTTGAGGAGGGGCGCAGATCTGTGTCTCGGCCATAGCTAGGAGCTCCACCGTTGGGTCAAGTGCAATAGATGGTCTGAATGTGTTAATATGTTCCACCACTAGGTGGGACTATAGCTCAGTCTTCAGGTAGGTTTTGAGACTCATTTtaaagcaggggtgtcagactccagtccaggggggctgcagtgtctgctggtttttgttccagcaggagctcccaatttcttaatgtcattatttactccaGTAGGCTTAtccaaaactttattttattttttatagccaCTACCTTACAATGTGTTGATGACTCTCaacattgaacccacagaacatttcagagtctggagataagtgttaaattaatccagttaattgatttaattagattaagtttggctggaacaaaacccagcagaaacTGTGGCCCCTCAGCACTTGAGTCTTGACACCCCGGTTTTAAGGGAtctagatttgtatttattttttgttgctaAGAGTTTGAAAGATTTAAACTCTGGTTTCTTTTTTGACCGAAGTATCCTAGAATGACTTGCACATACCCAGAGTTCCCCTAAggtgtcatttattttcatacatggAAATCATGTTGTATACCCTGGACAAAGACCATAAGCTTTCATTTaagatttgttatatttttttgtatgcactTTTAATACTCCAACCACTTAAttcaaatggtttaatttgcaTAGTTGTGGATTGTTCCATTGAACTAGTAtaggattttaaaaaaatgcacaaacaatGCAATTTAAAGGGCTTTTGCCCCACAAAGTCACACTTTAAATGGGTTagtaaaaggaaaaagagaacaaaagcCAAAGAACTTGGGTGTTTGAATCGAGATGTACAGTCTTTTGTCCTATGCCTTCATTCTCCCTACTGGTGATTGTTGCCATATTGTTCTTTCATGCAGTATTTAGAACATTTCGGCAGAAGTAAACTTAAATGGGTGCAGATGTAGCCAAATTGTATTAACCGAAGACTTAGACCAGTGGTATGTCTGTGATTCAGTGATGCTATCTGAATGTTGAAgagatgtattttgtgtgtctgtgtataggGGGGGTGTCACTATAGAAAGACGTCCTCTTATTTGTGCTAATTCTTATAGTATGATCTTTATCTTGTGAAGAATTTGCAATAATTCAAGTGTTTTCATCCACGGtgtgcatataaataaatgggtTGCATTGTATAAATAGCCCTGTAATTCCAAATGAATCTTGTGAATGTACATGTATACCCAGATCTGTATTGGCACATTTGTGATGTTTTCTAACTGTATTCCcgttataaaaaatgtttacaccTCTTAAATGGATTGTTTAATGGGaggttttaatttcaaattttgcACTTTAACTGCATGCTTCACCATTGTGACCTTGGCTTGGTGGATTATTGTTTGAATTAAGTGCAATGAATACtgcaattacattaaatgtctTGCATATGCTGTATACTTTTTACAATCTGCTTTTCTAAATAATACtgttcaaatgttttgtatatgtttagaaaataaacttGTAAATAAAGTCttatttcttttatatttttacattatttttttcctgccttATTCTTTTCTTCCCCAAACTGTATACAGTGTCTGTAACTACTCCACAAAACCAC

Function

GO: NA

KEGG:

id description
K11160 DGAT2; diacylglycerol O-acyltransferase 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016256 True 4144 mRNA 0.46 14 13676994 13705883

Neighbor

gene id symbol gene type direction distance location
AMCG00016250 NA coding upstream 59350 13597834 ~ 13617644 (+)
AMCG00016249 atg101,LOC107751375,LOC107686213,LOC107589731 coding upstream 88021 13583044 ~ 13588973 (+)
AMCG00016242 NA coding upstream 221078 13445038 ~ 13455916 (+)
AMCG00016239 usp25,LOC107653727 coding upstream 429978 13212058 ~ 13247016 (+)
AMCG00016240 NA coding upstream 488601 13185034 ~ 13188393 (+)
AMCG00016255 uvrag,LOC107577365,LOC107589407,LOC107686127,LOC107691651 coding downstream 1331 13707214 ~ 13714691 (+)
AMCG00016254 uvrag,LOC106603537,LOC106567946 coding downstream 20488 13726371 ~ 13742178 (+)
AMCG00016253 NA coding downstream 70639 13776522 ~ 13783628 (+)
AMCG00016260 emsy coding downstream 174923 13880806 ~ 13895173 (+)
AMCG00016261 NA coding downstream 244024 13949907 ~ 13954292 (+)
G12368 NA non-coding upstream 17335 13657393 ~ 13659659 (+)
G12347 NA non-coding upstream 37406 13638302 ~ 13639588 (+)
G12331 NA non-coding upstream 125136 13551594 ~ 13551858 (+)
G12330 NA non-coding upstream 130396 13546399 ~ 13546598 (+)
G12289 NA non-coding upstream 203209 13473488 ~ 13473785 (+)
G12406 NA non-coding downstream 123851 13829734 ~ 13830887 (+)
G12487 NA non-coding downstream 476722 14182605 ~ 14184686 (+)
G12489 dyrk1a,LOC107744208 non-coding downstream 489052 14194935 ~ 14196634 (+)
G12549 NA non-coding downstream 678022 14383905 ~ 14384657 (+)
G12566 NA non-coding downstream 691366 14397249 ~ 14398414 (+)
G12351 NA other upstream 39993 13635442 ~ 13637001 (+)
G12349 NA other upstream 45197 13631285 ~ 13631797 (+)
G12348 NA other upstream 49283 13621879 ~ 13627711 (+)
AMCG00016241 NA other upstream 287358 13271584 ~ 13389636 (+)
AMCG00016221 NA other upstream 890095 12778224 ~ 12786899 (+)
G12587 NA other downstream 731888 14437771 ~ 14438606 (+)
AMCG00016288 NA other downstream 1039433 14745316 ~ 14783535 (+)
AMCG00016329 NA other downstream 2778472 16484355 ~ 16486003 (+)
G13012 NA other downstream 3410910 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 3856535 17562418 ~ 17599581 (+)

Expression


Co-expression Network