AMCG00018151


Basic Information

Item Value
gene id AMCG00018151
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2832056 ~ 2838291 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018151
CTGAGCCTCCAGATTGAAATCCATTGGCAGTGTCCACTGCGCGGCTCTGCTCACACCCAGCAGCGCAGGGATAAAAGACCAGGTGCCGAGCCCGCTGGACACACCACACACCCGGCCTCAGCTGTCCTGCGCCGCCGGACATGGAGCTGCGACTCTTCCTGCTGTGCGCCCTGGCGGCCTGCAGCGCCTCGGCCCCGGTTAACAAAACCagcacaataaaaaaacaagtcaatGGTAAAGTAGTGCCTGCCATGGATGCTATCATTGCAATCAACCAGAGAGAAACAAAACCCTTCACAGCAAGTCGAACCATCAGCTTCACAGACATTGCCATCCCCAACAGCCGGACTGCCATGGTCTGCCCTGGACTCAAGGACTGTTTTTGGGACAAATCATCTGATGGTTTTGTCTATGTACCATATGTAATAGACCCGAGCTACGCTGCCTCTGAGCAGCGGTTGATCCTCGACACGCTGGCGTCCTTCTCCACCTTCAGCTGCATTGTATTCCAGCCCCGCAGCGACGAGGTGGACTTCATCAGCATCGTGCCGTTGGGCGGCTGCTGGTCGCTCTATGGGCGTGGGGGCGGAGAACAGCAGCTCTCACTCTCCAGGGCGGGCTGCGTGGCGAAACACATCATCAGCCACGAGCTCATGCACGCGCTGGGCTTCTACCATGAGCACAGCCGCAGTGACAGAGACAACTACATCGAGGTCCTGTGGGATAACATCCAGCCAGAGTACCAAAGACAGTTTATGAAGATGAACACCAACAACCTGGACGTCCCTTATGACTACCAATCGATTCTTCACTATAGTTGGAATGCTTTCGCTAAGTCTCCCGCGCTGATGACTCTGCGCTCCATCACCGACATCCCGCCGAGGGTGGGACTGGGCACAAAGATGACTCCCAGTGACATCCTGAGAGTGAACAGACTCTATAAGTGCGATGGAAAGGTCTCCCTTGCCCCCACAACCAAACCCACAACTACAAGcacaacaaccacaaccacaagcCCAActacaaccacaaccacaactacAACCACAGCCGAACCCCTTCTTCCAGATGATGCACCACAAGATGCTTCTGTCAGTGTTGCTAATAAAGCTTGTGGATACAACCTCACAACTGCAACTGGCAGCATTTCCTCTCCCAACTACCCTAATGCctacaacaacaaccaaatgTGCCAATGGAccattacaacaaaaaacaagTTATACCTGACATTCAAAGCCATGGCCCTGGAGGATTCTGTGGGCTGCAAGTACGACTACGTTTCGATCTACGATCTCATCCATAAAACCCACATAGGACCCAAACTCTGCGGCTTCCAAATTCCCTCTCCGATCACAACCCCCAGCAAGAGTATCATGATTGAGTTCAAGGCAGACTATTCCGTCAACAATAAGGGGTTCCTCATATCATACATGACCCTGTGAGGAAATGAATCCAATGGATTTTCTACAGGGAGGACAGAGGTAAATATATTACCTACAGCTGAATGGAAGACTGTAATTGActgtttttgtgcattttaattagtcTGTCTCTGTGGGGgggattattattaatgtaatgttgttttttaatggattgGTTTTACCCTTGCGCTAATTTGTAAATGGTAAAACTGTTGGAGCTGCTGTCCTTTTTAATCTTTCTGTTCTCTGTGTATATAGTCTAACTACATAATGTAAGTTTGTTGAATCCGTTTTATAAGtgacaattataattttgtgcttttgttaaaCCATATTTGATAAATCTCAGGAAACGTAATTTGGACTTCACAAGTTTATGTCCAACATAACTGGAACGTTTACCCTCCTTTGTTGACATCTGCAAACACTGAATGTAATTTAGCCACAAGAGTCACATGACCCTACATGCCACACACTGAGCACACCCTGGggatttattgttttgaaataaaagtttattattaacaatgtaCAA

Function

GO: NA

KEGG:

id description
K08076 E3.4.24.21; astacin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018151 True 1962 mRNA 0.48 12 2832056 2838291

Neighbor

gene id symbol gene type direction distance location
AMCG00018147 tsc2 coding downstream 49044 2751949 ~ 2783012 (-)
AMCG00018143 NA coding downstream 157705 2673497 ~ 2674351 (-)
AMCG00018141 NA coding downstream 260108 2566291 ~ 2571948 (-)
AMCG00018139 NA coding downstream 314599 2515317 ~ 2517457 (-)
AMCG00018140 NA coding downstream 334638 2493067 ~ 2497418 (-)
AMCG00018152 get4 coding upstream 1471 2839762 ~ 2847976 (-)
AMCG00018153 NA coding upstream 13138 2851429 ~ 2869367 (-)
AMCG00018154 NA coding upstream 33162 2871453 ~ 2875461 (-)
AMCG00018157 NA coding upstream 44197 2882488 ~ 2908429 (-)
AMCG00018160 NA coding upstream 219764 3058055 ~ 3060305 (-)
G114554 NA non-coding downstream 163395 2668460 ~ 2668661 (-)
G114456 NA non-coding downstream 456321 2368430 ~ 2375735 (-)
G114363 NA non-coding downstream 847907 1983652 ~ 1984149 (-)
G114304 NA non-coding downstream 953681 1751896 ~ 1878375 (-)
G114286 NA non-coding downstream 1297071 1533456 ~ 1534985 (-)
G114658 NA non-coding upstream 157744 2996035 ~ 2998258 (-)
G114681 NA non-coding upstream 238750 3077041 ~ 3077760 (-)
G114720 NA non-coding upstream 301804 3140095 ~ 3141310 (-)
G114739 NA non-coding upstream 562141 3400432 ~ 3401938 (-)
G114785 NA non-coding upstream 1069728 3908019 ~ 3910399 (-)
AMCG00018142 NA other downstream 184245 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 222577 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 543194 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 764472 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 825420 1985149 ~ 2006636 (-)
G114838 NA other upstream 1189725 4028016 ~ 4087031 (-)
G115020 NA other upstream 1747771 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 1807856 4646147 ~ 4651641 (-)
G115174 NA other upstream 2448095 5286386 ~ 5287873 (-)
G115183 NA other upstream 2461816 5300107 ~ 5304429 (-)

Expression


Co-expression Network