AMCG00018153


Basic Information

Item Value
gene id AMCG00018153
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2851429 ~ 2869367 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018153
gggcggggcaGGGTGTCAGGGCTCTGTGTGCTGCAGGGGGAGGCTAGGTGGGAGGGGCAGGGTGTCAGACGTCAGCCCCAAACCGTTGGGCCATCTGCTCTGCTTTGGACTCTGGAGgggcaaaccaacaaaaagaaaTGTAGTGCTGCAGCCGGAGGGGTGAGAGTTCACTGCACACAGTGACTCGGTGAGGACCAGTCTCCTGCCCAACAGATGGGGACTGGGCCCTGAACTGTGATTCAGTCAATTGCCCTTTCCGTGCCAGGCACCCTGAGGGACCTGTTCAGGTTCTCCCCGCTACTCTGACAGGGTCCTCTTAAGCAGTCTCCCCCCTCAGGTCTCCAGCGCACTCTTCAGTGCTTTAATTTTGGACAGTCAGTAGTGGGACCAAACTCTTCGCCATGATTTGTGCTGGTATGGTCCTGTTCTTCTGGTTCTGTTGGTGTTGTCCGTTTGTTTTGGTCTCTGTATTCATATCAAACGAAGGATGACCTCTAGAGACTTAGTGGTTTACCTACACAGCTCTATcgttcgtttttcttttttaaattgaaataatcaGCCTAGAGCCTGGTACACACGTACCTAGTTCTGTGTGGTtatgcaaatcaaatcaaatgccACCCTTATATGTAGCCGGCAGATTGCCGTGCTTCTGTTCGATTTCCGCACCACCCTGTGGGGCTGGGGCAGGCGGGGCGCTGGCCTGCAGACCTCTGGCATGATTAattcctttttatatttgtttggcagcacactctcacacattcTCGCATCCATTTTATCTCAACTTATgtcattgaaagaaaaaaaaaaaaaaaaagggtgtttttggtttttaaatgttaaaacaataacgggaagaaaacaaaaggaacacTGAGAGACCCAGTTGTGCAGAAATGgctcctgtctgtctgactcTGCTGGCCGGCCACGTGTTGCCCATGGAAAGGAAATCTGTGAGTGACGGAGGAAACACGGCCGCGGATTGGGCCCAGCTGGTCTCCTTGGTAACCAGGGAGATTACAGCAGCTCTGTCGCTATGGCGAGCGCCACGTGGGGAAAGTGCGCGATTCCCACACAGATCGACAAACGGCACTGCTCTGAGGATTCAGAATGATTGTGCCGTGTGTGTGGATTACATGTAcatataaagattaaaaaaaggcttttgaaTGCAATGGTCCTCCGCTGCAAATTGCAGGTGGCCAAATCTATGTCGCAGACTAGCAGGTTTTCAGTGGATCGGTATGAATCAGACATTTACACCCAAGTGATGAGTTATAATTTTTATAGACcggaaactaaactaaaaataatctttGTGGTTTTCTCAGTTCCTGCAGCTCTGCTTCTCGGGCACTCGCCGTGTGGCCAGCATGAGGCGGATTGAGTCCCGTCTCTCTGCCGAGCAGTCGCGCTGGGACAGGAGGTGGCCAGTCGAGGGTTAACCACCTGCGCCCGCTCCTCCATGTGGGAGTGCTGGGTCTTGATGCCACATTGTGCGCAGCGTACAGCGGGAGTCTTGTGGCAGAATGCGGTCCAGTTATTTTTATCGTCAGTCTGGGGGTGTGCAACATCAATACAGACCGCCAGGCTGGCTTTGCAGGAATTGGGCCTGTTTATGCTTCAGAGTGGTTCATCCGTTAAATCAAGACCCACGccctgctgtttatttttatttgtttgcttcctCCCCCACCACTCTGCATGTTCGTGGACAGACATTCCGATCTGAGCAGCATGGACAGAGCGGAGACTCCCTGGGCCACGCGGAGGTCATTAACACCTTGGTTTCTCCAAAGCCACGCGAGCGCGAGAGCCTCCTCTCTTGGCACGGCCGTGCCCTGTGCTGCAGCCCCGTGCTGGCCCACAGTGGCACGATTGTCTGGGGAGTCACAGCTGCTTGGAGTTTTGGCAGTGGCAGATTAGAGTGGTAGATGCCATCCTGGCAAGTGTAGCTGGTCAATATGGCTGGCGTGAGGCTGGCCATGTGGGGGAGCGGCCCTTCAAAAGCACATAATTGGCTCTGGAGGACTCGGTAATCCCGTGGGATGACCTGGCTGCTGGAGGCTGTGATTAGGGTGCTCTTGCCATTGCTGCTGCTGATCGCTTCAGACCCTGTGCTGATCTGCAGGGGAAGCATTGCCACAGCTGTCTCTTTAGTCTTCAGAGCCCCCCTGCCCATGTGCTGCTCTGACCAGTGGGCCGTGTGTCGGCATTTCTGTGTGAAGAGTCGTCAATAAGCAGCTCTGCTGTAAAGTCCATTTAAGTTGCTTCATCGCTCTTGCTTACTGTAGGACTGTCTCGAGATGAGTGCCAAGACACAGGAGGAGTTGGTGCTGCACAACACCACTTACATTTGTCTTTTTGGCTCGGTTTTGTTTGGTCTTTTCTTGCAAGTGCATAGTTGAAAAGGAAGTGACAAGTTTCTGAAAGCCTGTACTGATGTAAGTATCAAAGGATCTTTTATAGCGCTTGTACTAAACAATACTTGTCGATTTTTGAATTACTCGTATAGCTCAGCTGGGTCACAGTGCAAGAGTGTTTTCCTGACTTTGTGTCACTGAATCATGCTCTCTGTCCGCTGTTGTGAATCATAAAGTACAGGAGCAAATAGTTTAATAGtgtgtaattgttgttgttcagcACTTGTGCTCTGCCAGGATTTTTGTGAAATGCACTGTGGATTAATACTTCACATTGAAATGGTGCTGCATGCAGCTGCTCCCTATCTGTTATGCaggctgtttattttcaaatggttAAAATGCCAGCGTTGCCAAGTATGAGTCATGACAGGACTGACAGCCTCGCTGTGGCAGCACTCAGTTCTGCGGTTGCATAATTTCACTTGAAGCCTTTGACAAAACTGAGCTACTTCTATTTCTTCCAccaaatgtctttgttttcctaTTCCTTTTTCTCTGCACTTCTGATCTTGTTTACTTGAAGGTTTCTgaggttttttttcccccctgttttctctctccttcgCTGTGTTTCACTTTCTCTTCTGAAACCTGAAGGATTGTTTCCCCTCTTAATTCTCAATTACTGAAAGGTGTGATTTGATTATGCGTTCAGTGTAAGATCTCAGGGTAGGAAGAAACTTCTGAATTGTAATTGCTTACATGGGAGCCTCTGATGAATTGAGTTTTAAACGGTAAGAGGCTCTAGCTAGTTGTAATGCCAGTGTAAAAGTGAGAATTGGACTAAATGGAAACCGGTTCCATTGGTCAGTTTTATCAGCACCTTGACTGTACTTGGATAAGGGGGAAAGAGTAAATGAACACTGTACATTGTTTGAGCAAATGTAACCCGAGAGTTTGGTAAACGAGTAATGCAGAAGAACATGGTATAATGGATTCTGGTGCAGTAAGAGGTGTAAATATTGGGAGAGGGGCCATGTGTATCTGCTAGGTATCGACATCACCATGATGACCTCCTGTGGAAAAACGAATAAGAAAAGTGTAATGTTTGTAGGGGTCTTGTCTGCTCACTGATGGTGAACGCTGCATGGACAAGCAAAtggttttaaacaaatgcattcagtGTCTTGCTGACAGCTGCAGGAGGAGTCCCCACAGCTCCTGTGAGCCTTTATCTGCTAATCTCCATGGTGCTGTGGGTTAATTCCTGACCGCGCTGCACGTGGAGAGCGTCTCGCTGCTCAGATCTGTTCAGATCGGCATTCGCGGTCTCGTCAGCCAGGCAGCCGCACTACACATCTGAGTCTAATTCGTGGAAACCCCCTCGCAGCAGGGCCAGGTTGGTGTCTTACGATTGATAAGTGTCAATTAGTGATAAGTTGCTGATGTCCTCAGAAGTGCTGCCCACCTCTCTTCCAAAGCAGAGCTCAAGCTATTCGTCTGCGGCCCTGGATTTTGAGAACAAGCACCGGATCGAGCCCGTGTTCGACTCGCCCAGGATGTCCCGGCGTAGCCTCCGCCTGACCACTGGACACTTCTCTGACGACAGCTTCCTGGACACCAGCAGCCACAGTGTGTCCTATAGCGGCGGCTCCAAGACCTACAGGGAGTCCAAGACTTTAAAGAGCAGGACAGCGAGCAAACCGTCCTCATGCCTGACTCCTCGCAAGACCCAGGTGAACAGCTCTCTCCTGCTCGGCCACAACAGCTTCCAGAGCAGCCACTTGGACTCATCGCTGATGTCCACTGTGCTGGACGAGTCCTCGATACAGGAGAAGACATTTATGGACGGTTGGGGTCTGGATGAGGATGGAGACCCAAAAGGTGCCGACGCCACGCTGATCTTGGCCAATGGGGACATCAACACGGCCCAGACTCAGACCACCATGGTCAACGGCTACACCTGCAACGACTGCAGCATCCTCTCTGAGAGGAAGGGCGTCCTGACCACgtactcctcctcctcttcgtcCACAGCCGCGGGGCATGCGGCCGCCGGGCATGCGGCCGCCGGGCACGCAGCCGCTGGGCACACGACTGCCTCCACCGTGTACTGCCGGGACAAGACCAAGAAGCACAAGTCAGGTGTCCTCCAGCTTGTCAGAGATAAATGCTGCGGCTCGCTTGCTGGTGCGAAGGCATCAGTATGTTCCTTGGTTATGCTGCTCATTCAAAATATTCTAGTGAAGATCGGTTATGAAGCAAAAGCCCATTCAAGCTATTGCGGAAGCATGAATGTCAAGGAACTGATGACTGGAGACGGCCATCTGAATTTAAATGGGTCATTGTGTGACGACTGCAAAGGGAAGCAGCACCTGCAAATGCAGTCGGCCCACAAGCAGTCTTCAAGATCCACACGAGTCGCACGGACGATGTGGCACGTCGTGGCCTGTGCAGgCTACTATTTGTTTCAAGCTGTGCGGACTATCGCCTCTGCCGGTTGGTTTGTTACCAAGAAGCTCTTGTCTGTTCTGTGGGTGGCCGTAGTGTCTCCAGGGAAGGCCGCTAACGGGGCGTTCTGGTGGCTGGGGACGGGATGGTATCAACTGGTGACGCTGATGTCGCTCCTAAACGTGTTTATCCTCACAAGatGCCTCCCTAAACTCTACAAACTCCTGTTGCTGTTGATTCCGTTATTCCTCTTCCTGGGTTGGTGGTACTGGGGCCCGTCTGGTTTGCTGTCCTTCCTGCCGGCTCTGATGCAGTCCGAGGGGGAGGCTGAGTCTGAGATCTTTCCCACACCTTCGTCACCATCCTCACCCGGCGTCTCCGGCTCCTTCGACGCAGAGCGGGTGGCCCAGCTGGAGCGGCGGCTGGCCCTGCTGTGGGACAGCCACACCAAGAGCAGCCGGCAGGGCGAGGAACGCCACGGCGAGGTCCTGGGCCTCTACCACAGCCTGCAGGAGCGGCTGGCACAAGCCAGCAACAAGGAGGCCCTGTCCCTTTGGATCTCCAGCCTGTTTGAGGAGAGGCTGGCCCACCTGAAGGAGGACCTGCAGCAGGACCGGGCAGAGACTGAGAAGAATCAGGACGGGTATCTGGCTTTGCATCAGAGCCACGAGTCCCGGCTGGCAGACCTGGAGAGGCTCCTGCAGATTGTGGCATCCAAGACCGAGGAGCTGCAGCACAGGCAGGACTCGGCCACCCCAGCAGCTGTGAGTGAAGGAAGTGAGGATCAGGGCCTCCTGCTGTCCGAGGTGAAGCGGCTGGAGTTGGAGTTGAACAGAATAAAGGCTGACCTGCTGGGGGTGAAGAGCTGCCAGGGCAAGTGTGACAGACTGGACTCGCTCCAGGACACGGTGGAGGCGCAGGTGAGGGACTCGGTGAAGATGCTGATCTACGGCAGCCGGCAGGCGGAGATGCCCGAGTCTCTGCTGCAGTGGCTGTCCTCACAGTACGTCCAGCAGAGCGACCTGCAGGCCGTGCTGCTGTCCCTGGAGCGCAGCATACTGAGGAACATCAGCCGCCACAGTGGCCACGGCAAAGTGATGCCCAGCACCCAGGTGGTCACCAACGCCGTCCACCACGCCGGCGTCACGGGGATGTCCGAGGAGCAAGTCCGAGTGATCGTGCACAACGCACTGAAGCTCTACTCTCAGGACAGGACGGGTCTGGTGGACTATGCCTTGGAGTCTGGAGGGGGCAGCATCCTGAGCACGCGCTGCTCCGAGACGTACGAGACCAAGACGGCGCTGATGAGCCTGTTCGGGGTCCCGCTGTGGTACTTCTCCCAGTCCCCCCGAGTCGTCATACAGCCTGACGTTTACCCAGGGAACTGCTGGGCCTTCAAAGGATCCCAGGGCTACCTGGTCATCCGCCTCTCTCTGACCATCCTCCCCACCTCCTTCAGCCTGGAGCACATCCCCAAGGCCCTCTCGCCCACGGGCAACATCACCAGCGCCCCCAGGGATTTCACTGTCTACGGTCTGGAGGACGAGTACCAGGAGGAAGGGAAGCTGCTGGGTCAGTACACGTACAGTGAAGACGGAGAGTCGCTCCAGACCTTCGCCGTGACTGAGCAGAACGAAAAGGCCTATCAGATCATCGAGATCAGGGTGCTATCCAACTGGGGGCACCCCGAGTACACCTGCCTGTACCGGTTCCGAGTGCACGGGGAGCCCCACCAGCCCTGAGGGCCCTGACCCGACCCACCCCCAACTGTACATTTTGACCTTTTTTGTATATAGTGGAAGAACTGGGATTATTGACAGACTGAGGAATGTTCCCATGGAGGGAAATGAAGCTACTTTTACATTAAACTTCATGAAAGAGAGATCTGACCGATCCAGAACAATCTGACCAGCTCCTCAACTTACTGGCACTTGACGTCTGCACTGACCGCTGGCTCTCGGCCGGCCTGGGCTTCACGCTGGAAAGGTGGTGACCACTACCCCTACCTTGTAgtagaaaatgcttttatattgCTAACCACTCTGAATTTTATAACGGATGTATGTATAGGACTATAACACGCAAACCCACTCCTTCATTTCTGCTGGCTGGTGGTTGTGTCCCATTGCTGGGATGAACAGACTGCAAACCTGGTCCAAAtgaaccttttatttattgtatttttatttccccaccAAATCTACCCATACAAAACGCAACTGTCTGACGCAgaagtgggggggtgggttgaATTCACGATATTCAGTGGAGCAGGACACCTGGACAGGGCTGACAGATTATCATTGTACATTCTGTAAGGactactgatttttttttttttttcccgatTACATTTAATGGCCGAAGTACATGTTAAACCCTATAGAAATACTCGTATGAATCCACTACCCAAAGTTGACACTATCCTACTGCCTCTGGCCAATGCTAGACCGACGTGGCGCGATGAGGCCGAAtgtaactgtattttattgttcataGTTTGTCTTTAAAGTTGGCTATATCAGTGTTGCTTAAAACAGGTAcacattgtcattttttaaacattttgtttttatgttttatttttttgtacagaaaAGGACCCTCTTTTTCTTGTTATAGAAATGCATATTGCACAAGTCCTCcataatttgtataaatatggtttaaaaaaaaaaaaaaaaaaaggatgcaCTCTCCCGTCTAGATTAGTTGCCCCACTAGCGCATATCCAGGGTGTGCAGGGATGGGAAATGTTAAgaacactatttattttttaagaataatgAGCTAAAGAAAAGTTTGGACTttgtgcattgtatttttgtaaatgcttttcaaTCTATTTTGACCGTCTTGGGGCAgttttttgcttgtttctttttttatatatatattgtctttgCTGTTTAAAGACGGACAAACCGCTTTGGAAATGTTCAAATAATAAAGAGTTTAATTTTCTGAGA

Function

GO: NA

KEGG:

id description
K19347 SUN1_2; SUN domain-containing protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018153 True 7795 mRNA 0.51 23 2851429 2869367

Neighbor

gene id symbol gene type direction distance location
AMCG00018152 get4 coding downstream 3453 2839762 ~ 2847976 (-)
AMCG00018151 NA coding downstream 13138 2832056 ~ 2838291 (-)
AMCG00018147 tsc2 coding downstream 68417 2751949 ~ 2783012 (-)
AMCG00018143 NA coding downstream 177078 2673497 ~ 2674351 (-)
AMCG00018141 NA coding downstream 279481 2566291 ~ 2571948 (-)
AMCG00018154 NA coding upstream 2086 2871453 ~ 2875461 (-)
AMCG00018157 NA coding upstream 13121 2882488 ~ 2908429 (-)
AMCG00018160 NA coding upstream 188688 3058055 ~ 3060305 (-)
AMCG00018161 NA coding upstream 192246 3061613 ~ 3068554 (-)
AMCG00018162 NA coding upstream 203822 3073189 ~ 3075636 (-)
G114554 NA non-coding downstream 182768 2668460 ~ 2668661 (-)
G114456 NA non-coding downstream 475694 2368430 ~ 2375735 (-)
G114363 NA non-coding downstream 867280 1983652 ~ 1984149 (-)
G114304 NA non-coding downstream 973054 1751896 ~ 1878375 (-)
G114286 NA non-coding downstream 1316444 1533456 ~ 1534985 (-)
G114658 NA non-coding upstream 126668 2996035 ~ 2998258 (-)
G114681 NA non-coding upstream 207674 3077041 ~ 3077760 (-)
G114720 NA non-coding upstream 270728 3140095 ~ 3141310 (-)
G114739 NA non-coding upstream 531065 3400432 ~ 3401938 (-)
G114785 NA non-coding upstream 1038652 3908019 ~ 3910399 (-)
AMCG00018142 NA other downstream 203618 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 241950 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 562567 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 783845 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 844793 1985149 ~ 2006636 (-)
G114838 NA other upstream 1158649 4028016 ~ 4087031 (-)
G115020 NA other upstream 1716695 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 1776780 4646147 ~ 4651641 (-)
G115174 NA other upstream 2417019 5286386 ~ 5287873 (-)
G115183 NA other upstream 2430740 5300107 ~ 5304429 (-)

Expression


Co-expression Network