AMCG00018152 (get4)


Basic Information

Item Value
gene id AMCG00018152
gene name get4
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2839762 ~ 2847976 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018152
GCAGTATCGTAATACAGCCCTCAGTGCAGTGGGAGGACACGTGTCTGTCCGGAGTGTCCAGTGATAAGCGCTCATGAGGGGCTGCGGCTGCCGCTGCGCCTCCCCGGCCCTCTGCGAGTGAGACCCTGGCTACGGAAGCGCGGAGGTGCCAGTTCCGTTTtggcgttttctttttttccggCGGAGATCAGGCTGAGCGGCTGGGAACAACAATGATGTCGGAGCAGGAGGTGCTGAAATGCTCCAGTGCGAGGAACCGCGGCGGGGTGCAGCGGGTGGAGGGCAAGCTGCGCGCCAGCGTGGAGAAGGGGGATTACTACGAGGCGCACCAGATGTACCGGACCCTGTTCTTTAGGTATATGTCTCAAGGCAAACACGCAGAAGCAAGAGAGCTAATGTATTCGGGAGCTCTGCTGTTCTTCAGTTATAACCAGCAAAACAGCGCTGCAGATCTGTCCATGCTGGTGCTGGAGTCCCTGGAGAAGTCAGACACCAAAGTAGTAGATGAAATTTTAGAACACTTGGCAAAGCTGTTTAGCCAGATGGATCCCAACTCCCCAGAGAGAGTAGCCTTCGTCTCCAGAGCACTTAAGTGGTCCAGTGGTGGATCGGGCAAACTGGGCCATCCCAAGCTGCACCAGCTCCTCGCAGTCACACTATGGAAAGAGCAAAACTACAGTGAGTCTCGCTACCACTTCCTGCACTCCTCTGACGGGGAGGGCTGTGCCAAGATGCTGGTGGAGTACTCGGCCTCCCGGGGGTACCGCAGCGAGGTCGACATGTTTGTGGCTCAGGCGGTCCTACAGTTTCTGTGTTTGAAGAACAAAACCAGCGCCTCCGTGGTCTTCACGACGTACACACAGAAACACCCCTCGATAGAACAGGGGCCTCCCTTTGTACAGCCATTATTAAACTTCATTTGGTTCCTTCTACTCGCTGTGGATGGGGGTAAATTAACAGTCTTTACAGTGTTATGTGAACAGTATCAGCCGTCTCTCAAACGGGATCCCATGTACAACGAGTATCTGGACCGAATAGGACAGCTTTTCTTTGGCGTTCCACCAAAACAGTCTTCGTCATACGGTGGATTGTTAGGGAACCTGCTCAACAGCCTGATGGGCGccggggaggaggaggacgggGAGGAAGCCACAGAGGACAGCAGCCCCATTGAGCTGGACTAAACTAGGGCTGTGCCGGCAGGGCTCAGGCTGCATGGGTCAGACAGGTTATATTAGTAATAAACATGAGGCCATTGCTCTTGACTCGCCACAGCAACCGGGAGGAAGGACTGgcgttttcttatttttatttcttttggtttggtttggtttttcccccacattttgttttgttgtttgttggcTCTGGAGAATGATTGGCAGCCAGTGGGTGGGCCTTATTTATCACCGCCAGACACGGGGAAGTGGAATGgagcaagaaagagaaaaacatacaattcaACTTTGGGGAGGTGTTGATGGTGGGTGTCCGTTAACAAGCTGTATGTGTTTTTCTCAGCTAGGAGAGacgcacttttttttttcttatttaggtgcatatttaataatgaaaataaaaataatgttgttattattattattattattattaataataataaatatgtattaaaatatgacatCCCAGCACTTCTTAGCTATGGCTTAAGACTGAGCTGCAGTGAAAAACTGAATTCCGATGAATAAACTAAAGGAAATGAGTGTCAGAGCTGACAGACACAACATCGGATGCCACTGAATTCAGACATGCTGGACTCCCGACGCACACAGCAGGCAATTCACACGCAACATCGAGGCAGGTTCACCCCCATGGGAGACGCCCACTTCAGTGGGAAACCGCTGCGTTATTTATAAATCTGTAGTGCTTTAAGAGTAGAACAGCCAACACTGTTTCtacctgcattttgtttttataacatcCTGAACAAGTGAGTGTGGTCCGCTGGCCACACGTGAGGCGGTGGACTCTGTGGTTGGTTTGCTTCAGCGGCTGCGGTTCAGTGTGCCAACAACTGTTGAGCATGAATGTCATGACAATTCGTGATTAAAAGCTCTCTGGATCGCCCAGCTGCGTCCCACGTTCAGGGCCGGTGGGAGGCAGCGCGTTTCCTTACCTGCCTAAACAACCTGAAGTCTGATTTAAATGCCCCATGTCACTCTTAAGAGTTTCCACACCCCTGCAGGGTCTGAGCATGTGAGTGGAGGCCTGTAGTAGTTTGTCCTCAGGGCGCTGGTTAATAACATCACAATGCATGTCCCCTACAACACAGAACGAGACGTGATCTACTCGAGTTCATTTGTTGTGCAGGTGTGAGGACCACGTGCCTGTagctgtttttttaaggaagACCCCCATTATGAACTGCGCAGCTCCGGTTTTCTAATCCAGTGCTAATGCCCTGTAAAGATGCCACTGAGCGAACCTGAATCCTGCCTTCTGGCAAACGCACCGCAGCTCAAGCATTTTTTTCAGTGCAGAATAAATTCCAATGTCTTGTCTGCCTAAGGAAAGAAACAGACTGGAAAGCATAACTTGACAGTGATGGCTTAATTATGGAATGGGTGTTTAGTTGTGTTGAGGGactactgaaatgtttttgaggATAACTGAAGAATCCAGAGAAACGATTTTATCCCCTGCTCGTTTGGAAATCGCATGGCTCTTCTGATATTCTTCTGGATAATTTAATTTGGTAATGAAACaggaaattataaaataaaaacataaacaattgCATGACTATATTCTGTAAAGTAGACCCTCTTTTTATTTCTACTTTAAGTTGGtggaaattattgtattatccTCTGTGACACCAACTAATAATGTGTGTAGGGGATGGGAAATGGTATAATTTCAGAATCGGAGTTCACATTTGTGCCAGGCCTACTTTTCTGTCTAAGGGGTTTTAACAGTTTTCAACAATGATCTGACACTGACTTCTTAAAAATAGGATGTCCGGGCCATATTAGTGGGCTgaaatctaaattaattcaCGGAtggttgtttattgttttaagttATTAACTTACTTAGTTTCGATATCACCCAATTTGGAATTGCCGACTGGATCACCTCGGCTCTCTGCCCCGACTCGATATCAGCCCAGAAGACGGGAAGACCACATGCATGAGAAACGGGCTTCTTCACAGAGTACTGGTCCACCGCCCAAGCGGCACGGCCAAGGTACTGTAGAGAGATTCAAGATTTTCAAGATGTAAATTTCAAAGCTGCTGTGCTCTTCTATGGAGAGATCAGGAGTCAAACAGATGACCACCATGACAGACTGCCCCCACTGCCCTGGAGCTGGTGTGCACCTTGCATGTTGTAAATCTCAATCTGTTATTTTAGATGCATGAAGCCCGTGGCGTGTCATGGCTCCAGTATAGAGGCCACTTTGATTTCTGACTTTAGCCTCATAACTGCTACACATACATTTACCTGGAGCACAAAAAAATTCGTGCAGTTGTGTGCATCCCctgaaatgttattatttaccACATGCACTTTTAGTTTCTGTAGAAAAATagcacacacattcattttgtgttttacattatatatataaaaaaaggctCTTCTGGCGAAAGTGAAAATATGAGCTTCTAAATCCTTTACTACACATTTTCAAGGTGAGTGAAACAGTGCATCTCCTCTCATGTCACGCACTGTGTTCGTAACACACTCATCTGTGGACACTTCCCAAGCAAATCAGCCtatgaattaatgaaaataagatGCAGAGATCTTGTGTTTTAGCACAGTGATGTCTCCACAGTAATGCCAATGTCTATAAATGCCAAGCTGACCAGCGATGGTCTGACACGACTGACTCTGTTTCCAGCCTCCTGCAgtacattgttttttcatttttccaagTTACAAAATATTGATATCTCTCCTGATAACACATCCAGTAAATGTTTTAGATACATTTCTCTATCGGGACCACTATAAGCTACAGGTTGGCATTTAGACTTGTCAAAAGTGTCTCTCTGCTCCATAAGAGGAATTTGTAGAGATTGTTTTTAAgcaatcattaaaaatgcaattgtatGATTTGTTCTTTTACATGCTGTCCAGTTATGTTTGGCTCCTGACTGGAGGCAAGGGGGATTTGAGAGCCATAACCTGTCTGAACCAAGCTACCCAAGTGTGGGACTGAGCTCTTTtgtaaactgaactgaaaaactATGACtgtacataaaacacattttaaaagccca

Function

symbol description
get4 Predicted to be involved in protein insertion into ER membrane. Predicted to be part of BAT3 complex. Predicted to be active in cytosol. Orthologous to human GET4 (guided entry of tail-anchored proteins factor 4).

NR:

description
PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2

GO: NA

KEGG:

id description
K23387 GET4; golgi to ER traffic protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018152 True 4250 mRNA 0.46 9 2839762 2847976

Neighbor

gene id symbol gene type direction distance location
AMCG00018151 NA coding downstream 1471 2832056 ~ 2838291 (-)
AMCG00018147 tsc2 coding downstream 56750 2751949 ~ 2783012 (-)
AMCG00018143 NA coding downstream 165411 2673497 ~ 2674351 (-)
AMCG00018141 NA coding downstream 267814 2566291 ~ 2571948 (-)
AMCG00018139 NA coding downstream 322305 2515317 ~ 2517457 (-)
AMCG00018153 NA coding upstream 3453 2851429 ~ 2869367 (-)
AMCG00018154 NA coding upstream 23477 2871453 ~ 2875461 (-)
AMCG00018157 NA coding upstream 34512 2882488 ~ 2908429 (-)
AMCG00018160 NA coding upstream 210079 3058055 ~ 3060305 (-)
AMCG00018161 NA coding upstream 213637 3061613 ~ 3068554 (-)
G114554 NA non-coding downstream 171101 2668460 ~ 2668661 (-)
G114456 NA non-coding downstream 464027 2368430 ~ 2375735 (-)
G114363 NA non-coding downstream 855613 1983652 ~ 1984149 (-)
G114304 NA non-coding downstream 961387 1751896 ~ 1878375 (-)
G114286 NA non-coding downstream 1304777 1533456 ~ 1534985 (-)
G114658 NA non-coding upstream 148059 2996035 ~ 2998258 (-)
G114681 NA non-coding upstream 229065 3077041 ~ 3077760 (-)
G114720 NA non-coding upstream 292119 3140095 ~ 3141310 (-)
G114739 NA non-coding upstream 552456 3400432 ~ 3401938 (-)
G114785 NA non-coding upstream 1060043 3908019 ~ 3910399 (-)
AMCG00018142 NA other downstream 191951 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 230283 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 550900 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 772178 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 833126 1985149 ~ 2006636 (-)
G114838 NA other upstream 1180040 4028016 ~ 4087031 (-)
G115020 NA other upstream 1738086 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 1798171 4646147 ~ 4651641 (-)
G115174 NA other upstream 2438410 5286386 ~ 5287873 (-)
G115183 NA other upstream 2452131 5300107 ~ 5304429 (-)

Expression


Co-expression Network