AMCG00018154


Basic Information

Item Value
gene id AMCG00018154
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2871453 ~ 2875461 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018154
ctgcccttgttctcaactcTACACACTATAGTGCGTTTGGGTCAATTTAGTTTATGATTGTGATATAATATGTTGTTAAAATGCCAGTCCCTCTGTTTGGGGGGGGTTGATCTCACTGTTCGTGCACTggctgtacatttaaaataaacgcACTGATATTGAAGTCCTGAAAGTGATTCAGGACGGGGAGAGACTGAGTCATGTATGCCACGCCTGTCTTAAAATAGCAGTGAAATGTATAGCCTACGTGTCCTATTCGCCAGTCCCAGTAGCTTATGCGTTTTCAATTCGTCGAGCATAAAGGGACAGTCAAACTCGGTTTTACTTCATGGCTTTGGATTTCCGTTTATGAACTTTGGAGCAGGTTTAGTTGGATTGTACTGTATCCCAAGAAATCGTGGGGGCTGGATATGCGTCGTCCTTATCCAATAGATTCAAAGTGCGCCCTTGACTGACAGTAGCGGGTCTGGAGTGGGAGGACCAGCTCGGCGAGCCATCCTTCAGGCTTTGTTGCGTCTGGGAAGCCATTTTGGAAATCTGTAGTGCTGATCGCGAATTTCACTGACAAGTTATCAACTTGGACCCCCTCGGAAAGCCTCTACCCAGCGCCAGCAGGTGCCCGGGTCCAGGGCAGCCCCTCTGCGGTTCTGCGAGCCGGGATGCGGGCGGCAGGTCGCAGCTCTCCGCGGCTGGATTGCGCTCCTGAGCTCTGAGACCGATGGACTGACAGATACTCCTGCATCGTCTGCTCAGAGAGTGACCATGGATTTCTCTCGCCTGCACATGTACACCCCGCCCCAGTCTGCCCCCGACAACACGGGCTACACCTATTCTCTCAGCACAGCCTCCACTGGTGTGTGCGGACCACTTCACCGAGAAGGGGAACCACACCCTGACCGGGCTCTGTACGGGACTGCCACGATGTTTGAACACTTGCCTTATAAGCTGCACAAGTTTGTGCAACATTGCGACCAGGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018154 True 981 mRNA 0.52 4 2871453 2875461

Neighbor

gene id symbol gene type direction distance location
AMCG00018153 NA coding downstream 2086 2851429 ~ 2869367 (-)
AMCG00018152 get4 coding downstream 23477 2839762 ~ 2847976 (-)
AMCG00018151 NA coding downstream 33162 2832056 ~ 2838291 (-)
AMCG00018147 tsc2 coding downstream 88441 2751949 ~ 2783012 (-)
AMCG00018143 NA coding downstream 197102 2673497 ~ 2674351 (-)
AMCG00018157 NA coding upstream 7027 2882488 ~ 2908429 (-)
AMCG00018160 NA coding upstream 182594 3058055 ~ 3060305 (-)
AMCG00018161 NA coding upstream 186152 3061613 ~ 3068554 (-)
AMCG00018162 NA coding upstream 197728 3073189 ~ 3075636 (-)
AMCG00018168 ubfd1,LOC106601113 coding upstream 224269 3099730 ~ 3103442 (-)
G114554 NA non-coding downstream 202792 2668460 ~ 2668661 (-)
G114456 NA non-coding downstream 495718 2368430 ~ 2375735 (-)
G114363 NA non-coding downstream 887304 1983652 ~ 1984149 (-)
G114304 NA non-coding downstream 993078 1751896 ~ 1878375 (-)
G114286 NA non-coding downstream 1336468 1533456 ~ 1534985 (-)
G114658 NA non-coding upstream 120574 2996035 ~ 2998258 (-)
G114681 NA non-coding upstream 201580 3077041 ~ 3077760 (-)
G114720 NA non-coding upstream 264634 3140095 ~ 3141310 (-)
G114739 NA non-coding upstream 524971 3400432 ~ 3401938 (-)
G114785 NA non-coding upstream 1032558 3908019 ~ 3910399 (-)
AMCG00018142 NA other downstream 223642 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 261974 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 582591 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 803869 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 864817 1985149 ~ 2006636 (-)
G114838 NA other upstream 1152555 4028016 ~ 4087031 (-)
G115020 NA other upstream 1710601 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 1770686 4646147 ~ 4651641 (-)
G115174 NA other upstream 2410925 5286386 ~ 5287873 (-)
G115183 NA other upstream 2424646 5300107 ~ 5304429 (-)

Expression


Co-expression Network