AMCG00019205


Basic Information

Item Value
gene id AMCG00019205
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8781781 ~ 8784939 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019205
ATGAAACgtacattgttatttttgacAGATGAGCCAAGATCTACGCTCACCACAGCTTGCCAGACCAAGAGCCTCCAGTTTAGAACCATTGCCCCTAAAGCCCCAGCCGTCCTCTCATGCCAGTCCCCTTCTCCTCTGCCCGAGGCTCCGGCAGTCAGCCCCAAGTCCATCATCGTTCCAGCGCAGAATTTCGCCTTGATGCAGGTGGCTGGACAGGAGGGGACCTTCTCGCTAGTGGCCTTGTCCCCATCTGTGTCACCGCAGTCAGCACCACCGATTCAGAAAGGCCTGACCTTcccaaaaaacatgaaactgcCCATCCCGAGATACCCGCCTACGAGAAGCAAGCACACTCCGGAAAAAAGTGCCCCGGTTCAGGGTGTTCATGGGCTCACACCCACCAAAACAGTCATGCAACCAAAAGCTGCGGTGCAAACGCAGAGCCCCAACTCCTCAGACACCCACTGTGCTGTAGAGGGGCCTGAGCAGGTTATACTGATTGACTCGGGCTCCTCTGAAATTGCAGTCACCACGTTGTTGTCGGAGAATGCTGTTCTGTATTCTGGGGCTCAGGTGGAGAAGCCTGTGGACCCAGACAAGACACGTTTAGATCCAGCCACTCCCAGCATTCTGCAGAATCTGCAGTTTCGGGCCAGCGCTCCCCGAGAACCACATACTACCACGTCCTTAGCAAGCAGCAGCAGTTCCACAACAAACATAGAAAATGAAGGAGAGAAATTCAGGCAGTGCTTATCAAAGCCAGCTGGACAGTCTACTAGCAGCATCGCTGTCCTCTCGCCCGCAGTCTTTAGCAAGGCCGTTCAGATCATCCCATCGCCTCCTAAAGGTAAGCTGCCCATCCTGCCCTACTCAAAAATGAAGAACACCTATTTGCCAGTGGCTAAACTCAATGTGAAATCCCCTGAGAAGAGCTCTCCTGCAACCCGGCCTGGTCTTGGCAAAGCAACAGATCTCACACCAAGGACTGTTGTAGCTTCTGATCTTTTTTATCAAAAGCAGACACCAAACTGCTTGCAGCACAACCCACCACCGGCAAATCCAAGTAGCCTACCAACTGTGGGATTGGATGCCCTACAGAAGCCAGCAGGCAAGAAAAggggaaggaaaagaaagaccATAGAGGACATACTAGCTTTTGAAGCCAGAAAGAAGAGATCCCTGTCTTTCTTTAGGAGAAGAACTCCAGATAAGCCAAATCTGGTCAATAACACGTCCAAAGACAAAGTTGCAGATATATCGAAGAAGTATCGCAGCATCAGACCAAAGCCTGTGCTTTTAATGGAGGCTGTACCTCAGTTGGTGGGTCTGCCATCCCTCTCAGCTCCCGAGTGCCTGGAGCCGGAGTTTCTCATCAGCCGCAAAACTTCAGAGTGTCAGAAACTGGATCATACGTGTGGCAGAGTGGAAACGCCCAAAGCTGTGGGGTCCAGCTACATGTACCTTGGGAATAAACAGCTGCACAGATGCCCCACCTGCAGCCGCTGCTTTCAGTTCAAACACCACCTCCAAAGCCATATGAACAGCCACACCAACAGCCGTCCCTACCTCTGTCCCATGTGTCGCAAGACATACGCCCACTCGGGCAGCCTGAGCACACACATGAAGCTGCACCACACCGAGGGACGGCCCAGAAAGAGCCTCCGCTGTGAGTTCTGCGAGAAAGCGTTCGGCTACGTGGGGGTCTACTTCAGCCACCTGAAGGAAGTGCACAAAGTAATCCTGACCGTGGAGCCCTCTGTCAGTCACCACGAAGAAGATATTGCTATAGAGGgGGAGATCTCCCCAGGAGCCACTGATGACCAGGGGACGGACCAGGAGGAGCCCGTGGAGCTGCAGATCAAGTGTGGACGCTGTCAAGCCATCACTCCCACCTTCGCCGATATGAAGCTCCACCTGCTGTACGTGCACGGGGAGGAGGTGCAGGTGCGTCTGAAGGAGGGCGTCCtgcaggggggcagggaggcgGAGGACGAGCTGGTCAAACACGCCGCCCACTACTGGAGGACGCTCAACGAGAAGAGGAACCTCGTCAAGTGTGGCAGCTGCCAGGAGGagttcttctccttctccaaaCTCAAGAGGCACATTGACTGTCACCACCAGGACGAGGTGGAGGTGGCAGTGGAGTGTGCCACCGACAGACCGGAGCCTGGGTCGGAGAGTACCGGCTCCACCGAGGCGCACAACAGCGTGGCTCCGAGACTGGGGTCGGCCTTCAACTGCCTCCTGTGCAAAGGCGTTCTGGACAGCAAGGACGCGCTGTTCGAGCACTGGAGAGAGCAGCACAACTGTGAGGAGCCCGCAGTGCTGTGGACCGTGGTGAGCTCGTTTATGGAGCGTGAGCAAATCAACCTTTCCAGTGAAAACCCAGAACAGTAGGAAGCTGTCTGTTCTTATTCtgcacaaacaaaactgtactgtatcctacatttctgaacttggaatgAATAAATTATAGCACAAACAACACACTGCATTGATGCTGCTTGGCTAAGGAGCTGTTTGAGGTGGTTCACAAAGACGCCAAAAGGCCTTCGCTTTTTAGTTTGTCTCTTCTTTAATGTCTTCAGTACAAACGTGAAGTAACGTATTGCCCTACATCTAATAAGCATATTCTTATTAGTAGAAAATGTATGTACCAAAATGTGGACTATATTTTAGTCTGTCTGTTCAGTGCCTAAAAAAAGATGTTTGAAAATACACTGGTAGTTAAGAGATAAGTATGGCAAAGATTACTTTTGTTAAAGAATGCTGAGAGAAAATTGAATATGCTAATAAAACAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019205 True 2806 mRNA 0.52 2 8781781 8784939

Neighbor

gene id symbol gene type direction distance location
AMCG00019202 arhgap12,LOC102789345 coding upstream 175661 8577925 ~ 8606120 (+)
AMCG00019200 NA coding upstream 240476 8540613 ~ 8541305 (+)
AMCG00019201 LOC101470268,LOC102291500,LOC102212547,LOC103361717 coding upstream 259927 8497875 ~ 8521854 (+)
AMCG00019195 NA coding upstream 319846 8447880 ~ 8461935 (+)
AMCG00019196 NA coding upstream 358447 8423146 ~ 8423334 (+)
AMCG00019206 NA coding downstream 261979 9046918 ~ 9055856 (+)
AMCG00019214 NA coding downstream 572159 9357098 ~ 9376745 (+)
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding downstream 622362 9407301 ~ 9414186 (+)
AMCG00019217 armc4 coding downstream 841471 9626410 ~ 9628658 (+)
AMCG00019218 armc4 coding downstream 869387 9654326 ~ 9663886 (+)
G32113 NA non-coding upstream 609920 8171645 ~ 8171861 (+)
G32048 NA non-coding upstream 1160969 7620504 ~ 7620812 (+)
G32010 agap3,LOC107383869 non-coding upstream 1349837 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 1556784 7224632 ~ 7224997 (+)
G31947 NA non-coding upstream 1961746 6819765 ~ 6820035 (+)
G32235 NA non-coding downstream 110300 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 378704 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 523698 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 564910 9349849 ~ 9352655 (+)
G32321 LOC103376870 non-coding downstream 908330 9693269 ~ 9750270 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 397189 8345455 ~ 8384592 (+)
G32005 NA other upstream 1360698 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 2842184 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 4413578 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 5570891 3190612 ~ 3210890 (+)
G32286 NA other downstream 476435 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 544540 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 584959 9369898 ~ 9628662 (+)
G32539 NA other downstream 1619700 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 5654314 14439253 ~ 14486706 (+)

Expression


Co-expression Network