AMCG00019454


Basic Information

Item Value
gene id AMCG00019454
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 20977933 ~ 20989120 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019454
ATGAAGTGTTTATCTCAGGAATGGCTGAGTGGGATTGCTCTACTATTTATATCTCAAACAGTTGTCACAATGGTCATCCCAAATTCTACTCATTTGGAGGCCTTGCTGGAAAAGTACATGGATGAGGATGGAGAATGGTGGGTGTCCAAGCAGAGAGGCAAGAGAGCGATCACTGAGAGTGATATGCAGGTTATCCTTGACCTACATAACAAACTCAGGGGTCAGGTTTATCCGACTGCTGCAAATATGGAGTACATGAACTGGAAAGATCTGCAGAAGCCTGGGCAGAAACATGCTTGTGGGAACATGGGCCTGCTAGCCTTCTTCCCTCTATTGGGCAAAACCTTGGAGCTCACTGGGGCAGGTCTATATCGACCACCAACATATCACGTTCAGGCATGGTATGATGAAGTGAGAGACTACACCTTTCCATATCCTCAGGAATGTGACCCATATTGCCCCTTCAGGTGCTCTGGGCCAGTCTGCACTCACTACACACAGgtagTCTGGGCAACCAGTAGCCGGATTGGCTGTGCGCTGAACTTGTGCCATAACATGAATGTCTGGGGGCAGATCTGGCCCAAGGCTATTTACCTTGTTTGCAATTACTCTCCAAAGGGAAACTGGTGGGGTCATGCACCTTACAAAAATGGCCGATCGTGCTCCGCTTGCCCACCCAGCTATGGCGGTGGATGCAGGGAGAATCTCTGCTATAAAGATGATGGCTCAAATAGACAACAAGAACCCGAGGAAACAAATTACGTTGAGCCTGAAACACCAAGAACCCAAGTACCAAGATCCAGGCCACATACCCCCACCTCTTCTACCCCGAATATAGTCACATGTGAAACACGACTACGTGACAAATGCAAAGGAACAACGTGTAACAGATATGAATGCCCTGCTGGTTGCTTGTACAGTAAAGCAAAAGTTATTGGAAGTGTCTATTTTGAAATGcaATCCAGTATTTGCAAAGCTGCTTTACATTATGGAGTGATAGATAATGAAGGTGGCTGGGTTGATGTTACTAGACAAGGCAGAAAGGAGTACTTTCTAAAATCCAACAAGCATGGGGTACAGTCTATAGGGATATACTGTCCCCACAACTGCATGCAAGAAAATCCACACATAGCTCGTGTGATTGGGACACGTTTTTATTCCGATAAATCCAGCATATGCCGAACTGCAGTCCATGCTGGTGTGATTAAAAACCATTTAGGAGGCTATATTGATGTGATGCCTGTGGacaaaaggaaacaatacaTTGCTTCATATCAAAATGGGATATTCTCAGAA

Function

GO: NA

KEGG:

id description
K24243 CRISPLD; cysteine-rich secretory protein LCCL domain-containing

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019454 True 1296 mRNA 0.46 11 20977933 20989120

Neighbor

gene id symbol gene type direction distance location
AMCG00019455 LOC107092069 coding upstream 22887 20952419 ~ 20955046 (+)
AMCG00019453 gdap1 coding upstream 99119 20874430 ~ 20878814 (+)
AMCG00019450 NA coding upstream 199017 20777256 ~ 20778916 (+)
AMCG00019441 rdh10,rdh10a coding upstream 351896 20612346 ~ 20626037 (+)
AMCG00019440 NA coding upstream 412653 20555707 ~ 20565280 (+)
AMCG00019459 dok6,LOC107741641 coding downstream 211743 21200863 ~ 21209681 (+)
AMCG00019460 NA coding downstream 342142 21331262 ~ 21331771 (+)
AMCG00019464 NA coding downstream 900943 21890063 ~ 21893971 (+)
AMCG00019463 NA coding downstream 905757 21894877 ~ 21899711 (+)
AMCG00019472 neto1,neto1l,LOC107727239,LOC107589957,LOC107662554 coding downstream 1117041 22106161 ~ 22108328 (+)
G34204 NA non-coding upstream 201317 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 230962 20672987 ~ 20746971 (+)
G34183 NA non-coding upstream 342661 20633077 ~ 20635272 (+)
G34093 NA non-coding upstream 881483 20095318 ~ 20096450 (+)
G34086 NA non-coding upstream 899479 20075178 ~ 20078454 (+)
G34235 NA non-coding downstream 101024 21090144 ~ 21090416 (+)
G34278 NA non-coding downstream 472562 21461682 ~ 21461891 (+)
G34378 NA non-coding downstream 1586854 22575974 ~ 22577472 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 1791111 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 1799888 22789008 ~ 22789463 (+)
G34170 rpl7 other upstream 367044 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 1522796 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 1683725 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 1956521 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 3525274 17449320 ~ 17452659 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 1626503 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 2196696 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 2244150 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 2683005 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 3056569 24045689 ~ 24086481 (+)

Expression


Co-expression Network