Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019843 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 49111751 ~ 49118626 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016311 | dephosphorylation | biological_process |
| GO:0004721 | phosphoprotein phosphatase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019843 | True | 297 | mRNA | 0.47 | 5 | 49111751 | 49118626 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019842 | LOC106568821,LOC106599468,LOC105018340 | coding | upstream | 876 | 49107959 ~ 49110875 (+) |
| AMCG00019844 | LOC107690276,LOC107721720,LOC108428318 | coding | upstream | 12979 | 49085741 ~ 49098772 (+) |
| AMCG00019841 | NA | coding | upstream | 120808 | 48941855 ~ 48990943 (+) |
| AMCG00019840 | NA | coding | upstream | 249317 | 48841046 ~ 48862434 (+) |
| AMCG00019837 | NA | coding | upstream | 570367 | 48541037 ~ 48541384 (+) |
| AMCG00019845 | mnx1 | coding | downstream | 166413 | 49285039 ~ 49288627 (+) |
| AMCG00019849 | lmbr1,LOC106578611 | coding | downstream | 205593 | 49324219 ~ 49328448 (+) |
| AMCG00019848 | NA | coding | downstream | 223088 | 49341714 ~ 49362385 (+) |
| AMCG00019852 | NA | coding | downstream | 404513 | 49523139 ~ 49533144 (+) |
| AMCG00019855 | NA | coding | downstream | 509751 | 49628377 ~ 49637820 (+) |
| G37876 | NA | non-coding | upstream | 197242 | 48914246 ~ 48914509 (+) |
| G37871 | NA | non-coding | upstream | 247991 | 48863531 ~ 48863760 (+) |
| G37820 | NA | non-coding | upstream | 473587 | 48637343 ~ 48638164 (+) |
| G37784 | LOC100846954 | non-coding | upstream | 536100 | 48522875 ~ 48575651 (+) |
| G37963 | NA | non-coding | downstream | 442877 | 49561503 ~ 49561789 (+) |
| G37966 | NA | non-coding | downstream | 449966 | 49568592 ~ 49568857 (+) |
| G37969 | NA | non-coding | downstream | 453906 | 49572532 ~ 49572765 (+) |
| G37971 | NA | non-coding | downstream | 458496 | 49577122 ~ 49577473 (+) |
| G37972 | NA | non-coding | downstream | 465497 | 49584123 ~ 49584372 (+) |
| G37779 | NA | other | upstream | 660584 | 48450628 ~ 48451167 (+) |
| AMCG00019820 | efr3a | other | upstream | 1453750 | 47622768 ~ 47658001 (+) |
| G37561 | LOC100136012 | other | upstream | 2320266 | 46791027 ~ 46791485 (+) |
| G37372 | sugct,LOC107687505 | other | upstream | 3541814 | 45279455 ~ 45569937 (+) |
| AMCG00019785 | NA | other | upstream | 4667995 | 44435922 ~ 44443756 (+) |
| G37962 | NA | other | downstream | 439856 | 49558482 ~ 49561383 (+) |
| G37964 | NA | other | downstream | 444268 | 49562894 ~ 49563214 (+) |
| G37968 | NA | other | downstream | 452561 | 49571187 ~ 49571486 (+) |
| G38084 | NA | other | downstream | 1725129 | 50843755 ~ 50845879 (+) |
