AMCG00019840


Basic Information

Item Value
gene id AMCG00019840
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 48841046 ~ 48862434 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019840
CAAAGCGTCACATTCCTGTGCCGAGAACTCACGTCTCCTGCAGCTGGATCACGTAACGGCCGCGCACTTGCGTCCGAGAATCGGGCCTGCGTGCTTACGTACACAAGGATCTCGGGGACGCGCACGTCGCTGCCTCATCTGAGAGTGGAGATGGCAAAGCGAGAAGCCTTCTTGCAGGCTGTCTGCAGGGACAAGGCGCCGGACTTCCTCAACTTCATTCAACGGCATAAGGACTCCACAGACCCCTTTGACCTGGTcgagctgctgcaggagctgcCGGAGAAGCAGAAAGAGCAGCTGTGGGAGAAGCTGGCCAGGCTCTTGACTGACACGCTGCAGGGCTTTCCCATGGAGAAGTGGAGCCGAGGGCTGGACGAGGACAGTGGGGATGAGATGGAAGCCGAGGTCCCTCCAGCTCTCATGGAAACCATGTCTATTATTGATGGAGTGACTTTAGTTGCTACTGCCTCCATAGCCGTAGTACAAGAAGATGTGATCTACGACGGCCTGCTGGAATGTGCCCATGTATTAAATATTGTTGTCGGTGCTCTGCCTTCCTCTGAAGCCATGGTGAAAATCTCAATCCAGCGGTTCTGCGAGAGCTGGTGGGAGAAGGGCCTGCCGGGCAGAGAGAATCTTGGGAAAACTGCCTTCCTCATGCTTCTGGAGAGAAACCTTTTACTGAGAAGCTCGgTAGCTGACATGAAACGTTTGTGGAATCTCCACGCAGTCCTTCTGACCTTCGACTTTGAGTCTGAAGCCAGTGAAGAAGTGAAAGACCTGCTCTTGCAATGTTTTCTGAGCGTGCAGCACATTAAACGCGAAGAGGGAAGGAGGTTTCTGATTTCCCTCTTCAGCTGGAATGTGAACTTTATCAAGATGATTCATGGAACCATTAAAAACCAGATTCAGTTTTTCCCCAAgttCATAATGGAACATGTGGGGGAAATGTACTTCAGAGCATGGAAAAAAGCGACGGGGCCCTTCTTAGAGGAAATTGAAACAGGCTGCCTCCAGGATTACATGCACCACGGGGTTCATTTGCACAGGAGCTCTCCTGTTCATGCAAAAGTGCGACAGATCCTGAGCTACTTTCACAATCAGAAGCTGCGCCAGGGAGTGGACGAGATGCTTTTCAGACTGTACCAGCCCATCCTGTGGAGAGCACTGAAGGCCAGGAACTCGGAAGTGCGGGCGAATGCTGCTTTGCTGTTCACCGAAGCGTTCCCCATTCAGGATCCCAGCTTTAACAATGAAGCCATGGACAGCGCCATCCAGAAGCAGTTTGAAGTGCTCTTTTCTCTCCTGGAAGACCCTCAGCCCCTGGTGCGATCGACTGGGATTCTCGGCGTTTGCAGAATAACGTCCAAGTACTGGGAGATGATCCCTCCTGCCATCCTGACAGACTTCCTCAAGAAAATGGTGATCGACCTGGCGGCTGACGTGAGCTGTGCTGACGTTCGCTGTGCAGTCTTCAAGTGCATGACTTTGGTTGTGGACAACAAGCTGAGCCACCCTTTGCTGGAGCAGCTGCTTCCCCTGCTGAAGAACAGCCTCCATGACAACTCGGAGAAAGTACGCGTGGCCGTGGTGGAGCTGCTGCTGAAGATTAAAGCTGTCCGAGCCGCCAAGTTTTGGAAAGTGTGTACCATGGAGCACCTCCTGGCAAGGCTGGAGACGGACTCCCACTCTGTTGCGCGACGGCTTGTCAACCTCCTCTTCAACTCCTTCTTCCCCGTCAACCAATCAGAAGAGGTCTGGTGTGAACGATGTGTTGCCCTAATTCAGATGAACCCAACAGCAGCACGGCGCTTTTACCAGTATGCCCACGAGCACACGGCTCCGACCAATATAGCCAAACTGATGCTCATGATCCGGAGATGTCTCAACGCCTGCATTCAGCAAGCTGGGAAGGAAGAGCAAGACGAGACTGAATCTAGCAACAAGGAGAATTCGAGTATCTTGGACGACGTTCTCTCCATCACTGACACTGCGACGATGGCCAGTTTACTGGAGGTCATCGTGATCCTCTGGCGCAGCATCCGCAGGTCCCTGGAGTTAAACGAAGAGGCCCTCCAGTACACCACAAGCAAGTTCGCCTCCATCCTGCCCGAcTGCGGTGTCCTGTCGAAATTGCGCAACCTGGAGAAAGGCGCCGTCGAGTCGCAGTACGGCACACTCATCGACTGTCTGTGTCGCTGGGGGCAGGCGGGACACGTGGTGGAGGTTGTGACTGACTGGCTTACGGATGCTTTGCCACAGAAAAAGAGCAGGGCGGACTCGGAGCGCAGAGTTCGCATCCTCGAGACAGCCGAGGCCAAACCAGAGCTCGCCCTAGACTACGTCGAGTACATGCTCACTTGCACGATGAACCGGGAGTTCCTGCTGAGTGTGCATCAGAAGAAATTAGTCCAGCTCCTGAAGGCCCTTGGGGCTTTGAAgGTAGTGTTCTACGCGTACATCAGTTCGTCTGAGATGGGGCCCTGTCAGATTGACAAGGAAACCGCAATGAGAGCCTACAGTCTTCATGGGCGCCTGAGTATCCACCTCCAGCACAAATATTTGGATGACCGCAGCTACCTCCAGGTGTTGGAGAAATCCGCAGCCTGGGTGGCAGAAAAAATTCTGCCTTTTCTGGTGGTCCCCAGTGAAGACACGGTCTCCGATCAGCAACTGACAACGACCAAGCAAGTGGTTGAAGACCGCCTGACCGTTCTGAGGGACGTGGTTATGGTTGGCCTTGCGGATGCAGACTTCAAGGGCCAAGCTCTGCACTTCTGCATAGCTGTGCTGCACGCTGAGAAGGGCTACATGTGTGTGCCGTCTCTGCTGTCTCTGCTAAAGGAGGTGGCCGAGGACTGCCTGGCCCAGAGCGCTCGCAGCCAGAGCGAGGAGCTGTCCGTTCTCCTGAGCGTCGTTGCCAACGTCTTCCAGAAGATCCTGGAAGCTGCAGCGCGTAGACTGCAGAAACAGCGAGAGGAGGGGCTGCAGTTGTGCCACTCCATCCACATGGTCCTGGGGGAGTTCCTCAATGTCATCCAGGACTGGCAGTCGGCAGACGCCTCTGTTGCACCAGCTGTCTTCTCCACCATCGTGGCTGCCCTGGTAGTGGAGTTAAGCCATGTTTTGCGGAAGGTTTCATCCGTGGAGGAGCTAGAACCACCAGAGAGTGTAAATGATCTTCCTCCACTTTCAAGCGCTTTACTGACTGTTATTCTCCGATCTCCTGGTTTGATCAGGTccttaatgagggaaataaacgAGTCAGTGGAATCGGAAGCTATAGATGGAGTGACAGGGCTGACCGCAGTCTTGTACATTTTAGCCGTGGTCATTCAGACAGCTAAATCGGACCAATCACATTTCAAGGACACGGCCATCTGCATTCAGAGGCAGCTGCATAAATATTACGGAGTCACAGCGGAAGACAGCAGAAACATCGAGAGAACCATTTATGAGTCTTCTGTCAAGATTGTCAAGGAGATTTTGCTGCCTATGCTGGAAGTGTCTCAAGCACCCTTCTTGGAGACGGATGTCAATATTATTAAGCCATTG

Function

GO: NA

KEGG:

id description
K11492 NCAPG2, LUZP5; condensin-2 complex subunit G2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019840 True 3555 mRNA 0.53 28 48841046 48862434

Neighbor

gene id symbol gene type direction distance location
AMCG00019837 NA coding upstream 299662 48541037 ~ 48541384 (+)
AMCG00019836 NA coding upstream 300283 48514674 ~ 48540763 (+)
AMCG00019834 NA coding upstream 464013 48363323 ~ 48377033 (+)
AMCG00019833 NA coding upstream 488226 48308234 ~ 48352820 (+)
AMCG00019835 NA coding upstream 536608 48258596 ~ 48304438 (+)
AMCG00019841 NA coding downstream 79421 48941855 ~ 48990943 (+)
AMCG00019844 LOC107690276,LOC107721720,LOC108428318 coding downstream 223307 49085741 ~ 49098772 (+)
AMCG00019842 LOC106568821,LOC106599468,LOC105018340 coding downstream 245525 49107959 ~ 49110875 (+)
AMCG00019843 NA coding downstream 249317 49111751 ~ 49118626 (+)
AMCG00019845 mnx1 coding downstream 422605 49285039 ~ 49288627 (+)
G37820 NA non-coding upstream 202882 48637343 ~ 48638164 (+)
G37784 LOC100846954 non-coding upstream 265395 48522875 ~ 48575651 (+)
G37783 NA non-coding upstream 291865 48543625 ~ 48549181 (+)
G37733 NA non-coding upstream 725269 48115465 ~ 48115777 (+)
G37703 NA non-coding upstream 931460 47906060 ~ 47909586 (+)
G37871 NA non-coding downstream 1097 48863531 ~ 48863760 (+)
G37876 NA non-coding downstream 51812 48914246 ~ 48914509 (+)
G37963 NA non-coding downstream 699069 49561503 ~ 49561789 (+)
G37966 NA non-coding downstream 706158 49568592 ~ 49568857 (+)
G37969 NA non-coding downstream 710098 49572532 ~ 49572765 (+)
G37779 NA other upstream 389879 48450628 ~ 48451167 (+)
AMCG00019820 efr3a other upstream 1183045 47622768 ~ 47658001 (+)
G37561 LOC100136012 other upstream 2049561 46791027 ~ 46791485 (+)
G37372 sugct,LOC107687505 other upstream 3271109 45279455 ~ 45569937 (+)
AMCG00019785 NA other upstream 4397290 44435922 ~ 44443756 (+)
G37962 NA other downstream 696048 49558482 ~ 49561383 (+)
G37964 NA other downstream 700460 49562894 ~ 49563214 (+)
G37968 NA other downstream 708753 49571187 ~ 49571486 (+)
G38084 NA other downstream 1981321 50843755 ~ 50845879 (+)

Expression


Co-expression Network