AMCG00019836


Basic Information

Item Value
gene id AMCG00019836
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 48514674 ~ 48540763 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019836
ATGTTCCTAAGTGTATTGCTGGTGCTACGCTGGAGGCAGTTAAAGCACAGCAAATTCTCTTCTTTCTTATTTAAAGTCTGTCAAGGAATAAGCAACAAGCTGACACTTCTGGGATCACCTGACAACCATTACACAAATCTTGTGAGGATGTACAGTAACTGTACTGTGGTGCTGGAAAACCTGGAAATCACCTATGCAGAAGAGTATCATGACCTTTCTTTCCTGAAGTCTATCCATGAGGTTGGGGGGTATGTGCTGATTGCCTTCAACAAGGTAGCCACTGTCCCCCTGGAGAACCTACGGATTATCAGAGGCCACTCGCTTTACGATGGCAAATTCGCTCTGGCTGTCTTGTCCAACTACGACACTAACTCCACTCACAAGAAAAATCTAAACTCAACCTTTGGAGTGAATGAGATGTCTCTGAGGAGTCTCACAGAAATTCTTAAAGGGGGTGTGAAATTCGCCAACAACCCACTGCTTTGTAATGTGGAGACCATACAGTGGTATGATATCGTGGACAAGACCACTAGCCCAGCCATTAATCTGATGCCGCCAAGCAAGAACTTTAAATgTAAGAAATGTGATCCATCTTGCTCCAATGGATCATGCTGGGGACCAGGTCCGAAGAACTGTCAAACCTTGACCAAGCTGAACTGTGCTGAGCAGTGCTCCCAGCGATGTAAGGGACCCAAGCCCAGCGACTGTTGCAATGAACACTGTGCCGCTGGCTGCACAGGACCCAGACCCACTGACTGTTTGCTGATGCTGTATAACCCCAACACCCACCAGCTGGAGACGAATCCCGACGGAAAGTACAACTTTGGAGCCACCTGCGTGAAAACCTGTCCCCATAACTATGTAGTGACAGATTATGGCTCTTGCGTGCGAACATGCAGCGCCAACACctttgaagtggatgagagTGGAGTCCGGAAGTGCAAGAAGTGTGAAGGAGTCTGTCCAAAAGCTTGCAATGGATTAGGCATGGGGAATCTCTTACATACTTTGTCTATCAATGGCTCAAACATCGAGTCCTTCAGAGACTGTACCAAAATCAATGGGGACGTTTCTATCCTCCCTGTGACTTTTCGGGGCGGGACAGTGACGCTGGCTGCTGTGAACCTTAAAATCACTTCACTGGGGCTGCACTCTCTGCGAGAGATCAGCGATGGCGATGTGGTCATCAAGAACAACCAAAACCTGTGCTACACCAACCAGGAGCAGTGGAAGATGTTCTTCAAGTCCAGCAAGCAGAATGCTCGGGTTTCTGACAATGAAGTCCCTAGTCAGTGCGcTGCCAGGAACCAGATTTGTGATGCTCTATGTACTCATGAAGGCTGTTGGGGCCCTGGACCCAACATGTGCTTCTCCTGTCAGTTCTTTATTCGGCAGCAGCAGTGTGTAAAAGCCTGCAATGTCTTGGAGGGGGAGCCCAGAGAGTTTGTGGAGGAGAATAGGTGTCTGCAGTGTGACTCTGAGTGCCAGCCACAGAACAAGAGCCAGACCTGCTCAGGCCCGTTCAGAAAGGACCAGCTTGTAGTGATGATTCTTCTTCTGTGCAGGTGTACCGGGCCTGGTCTGGATGGCTGTGATCATAAGATCTCTCGCCTGTCCTCAATAGCTGCTGGTGTGGTTGGTGGTCTGCTGGTCTTTGTCATCATTGCCCTGGGCATATTCATCTTCACACGCAGGCGCTACATCAAGAGAAAGAGGACGCTTCGCAGGCTGCTGCAGGAAAGAGAGAGCAATACTAGCTCCATGGGGACCTGCAGCAACAGAAATGGGGTGGGACATCCGATGAGGGAAGACAGCTTAATCCTGCGCTACATCACAGACCCCACAGATGGGACTTTGGAGAAGGACTTCCAGCCTGCACCAGGCAAGACCCTCTGCATGGCCACACTCCACCCATAG

Function

GO: NA

KEGG:

id description
K04361 EGFR, ERBB1; epidermal growth factor receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019836 True 1917 mRNA 0.50 16 48514674 48540763

Neighbor

gene id symbol gene type direction distance location
AMCG00019834 NA coding upstream 137641 48363323 ~ 48377033 (+)
AMCG00019833 NA coding upstream 161854 48308234 ~ 48352820 (+)
AMCG00019835 NA coding upstream 210236 48258596 ~ 48304438 (+)
AMCG00019831 LOC107555322 coding upstream 338338 48135651 ~ 48176336 (+)
AMCG00019830 NA coding upstream 408541 47977293 ~ 48106133 (+)
AMCG00019837 NA coding downstream 274 48541037 ~ 48541384 (+)
AMCG00019840 NA coding downstream 300283 48841046 ~ 48862434 (+)
AMCG00019841 NA coding downstream 401092 48941855 ~ 48990943 (+)
AMCG00019844 LOC107690276,LOC107721720,LOC108428318 coding downstream 544978 49085741 ~ 49098772 (+)
AMCG00019842 LOC106568821,LOC106599468,LOC105018340 coding downstream 567196 49107959 ~ 49110875 (+)
G37733 NA non-coding upstream 398897 48115465 ~ 48115777 (+)
G37703 NA non-coding upstream 605088 47906060 ~ 47909586 (+)
G37700 NA non-coding upstream 613059 47900317 ~ 47901615 (+)
G37693 NA non-coding upstream 630908 47883538 ~ 47883766 (+)
G37689 NA non-coding upstream 662640 47851604 ~ 47852034 (+)
G37783 NA non-coding downstream 2862 48543625 ~ 48549181 (+)
G37820 NA non-coding downstream 96580 48637343 ~ 48638164 (+)
G37871 NA non-coding downstream 322768 48863531 ~ 48863760 (+)
G37876 NA non-coding downstream 373483 48914246 ~ 48914509 (+)
G37963 NA non-coding downstream 1020740 49561503 ~ 49561789 (+)
G37779 NA other upstream 63507 48450628 ~ 48451167 (+)
AMCG00019820 efr3a other upstream 856673 47622768 ~ 47658001 (+)
G37561 LOC100136012 other upstream 1723189 46791027 ~ 46791485 (+)
G37372 sugct,LOC107687505 other upstream 2944737 45279455 ~ 45569937 (+)
AMCG00019785 NA other upstream 4070918 44435922 ~ 44443756 (+)
G37962 NA other downstream 1017719 49558482 ~ 49561383 (+)
G37964 NA other downstream 1022131 49562894 ~ 49563214 (+)
G37968 NA other downstream 1030424 49571187 ~ 49571486 (+)
G38084 NA other downstream 2302992 50843755 ~ 50845879 (+)

Expression


Co-expression Network