AMCG00019835


Basic Information

Item Value
gene id AMCG00019835
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 48258596 ~ 48304438 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019835
atgtttgggaagaaagacaaaaactcAAGTTcattggaggaggaggagggaggtgggggcagggtgACGGAGGCGGCCCACTACTGCATTAGTCAGCTGGGGCATCTCGGCCTAGTGCAGTTCAAGGATCTGAATCCCAGTACAGTGGCTTTCCAGAGGAGATTTGTGAATGAGGTCAAGAAGTGTGAAGAAATGGAGAGGATACTCCtccAGCCAAGCTGCAAAGGATTCTTAGAGAAAGAGATCATAAAAGCCGGCATTGTGATCTCACAGGGCTGTGAAAGTGGAAAATCTCCCTGCCCGCGGGAAGTGCTCGAGCTGGAGaagagaaagaaaggagggaGCACAGTCTCAGGGAGTGCTCCCATAAAGCTGCACAAAGTCTGTAGATGGAGCAATCCTGTAGAGCACGTCTTGTGTAGAGAGGTAACGGTGGAAGCACTACTCCACACGAAGCTTGAAAATGCTGTGTTTGACAGCAGGGTGCCAAAGAAGGAAGAGCTGGACATGCCAAGCACCTATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019835 True 525 mRNA 0.50 7 48258596 48304438

Neighbor

gene id symbol gene type direction distance location
AMCG00019831 LOC107555322 coding upstream 82260 48135651 ~ 48176336 (+)
AMCG00019830 NA coding upstream 152463 47977293 ~ 48106133 (+)
AMCG00019821 efr3a,LOC107749108 coding upstream 665442 47580292 ~ 47593154 (+)
AMCG00019817 NA coding upstream 1188848 47068996 ~ 47069748 (+)
AMCG00019810 NA coding upstream 1396898 46849919 ~ 46861698 (+)
AMCG00019833 NA coding downstream 3796 48308234 ~ 48352820 (+)
AMCG00019834 NA coding downstream 58885 48363323 ~ 48377033 (+)
AMCG00019836 NA coding downstream 210236 48514674 ~ 48540763 (+)
AMCG00019837 NA coding downstream 236599 48541037 ~ 48541384 (+)
AMCG00019840 NA coding downstream 536608 48841046 ~ 48862434 (+)
G37733 NA non-coding upstream 142819 48115465 ~ 48115777 (+)
G37703 NA non-coding upstream 349010 47906060 ~ 47909586 (+)
G37700 NA non-coding upstream 356981 47900317 ~ 47901615 (+)
G37693 NA non-coding upstream 374830 47883538 ~ 47883766 (+)
G37689 NA non-coding upstream 406562 47851604 ~ 47852034 (+)
G37784 LOC100846954 non-coding downstream 218437 48522875 ~ 48575651 (+)
G37783 NA non-coding downstream 239187 48543625 ~ 48549181 (+)
G37820 NA non-coding downstream 332905 48637343 ~ 48638164 (+)
G37871 NA non-coding downstream 559093 48863531 ~ 48863760 (+)
G37876 NA non-coding downstream 609808 48914246 ~ 48914509 (+)
AMCG00019820 efr3a other upstream 600595 47622768 ~ 47658001 (+)
G37561 LOC100136012 other upstream 1467111 46791027 ~ 46791485 (+)
G37372 sugct,LOC107687505 other upstream 2688659 45279455 ~ 45569937 (+)
AMCG00019785 NA other upstream 3814840 44435922 ~ 44443756 (+)
G37105 ssr1 other upstream 4201993 44053074 ~ 44056603 (+)
G37779 NA other downstream 146190 48450628 ~ 48451167 (+)
G37962 NA other downstream 1254044 49558482 ~ 49561383 (+)
G37964 NA other downstream 1258456 49562894 ~ 49563214 (+)
G37968 NA other downstream 1266749 49571187 ~ 49571486 (+)
G38084 NA other downstream 2539317 50843755 ~ 50845879 (+)

Expression


Co-expression Network