AMCG00020600 (cdk10)


Basic Information

Item Value
gene id AMCG00020600
gene name cdk10
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25579705 ~ 25588751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020600
GCCGAGTGTGATTGTTGTGTAAGGAAGGAGCGCGCTGTGTGCGGGCATGTAAACATTTCTCATCTGTTAACGTGTGTCTCTTGCTTTCGCTACACAGCGGAGGTTGAAGCCTGATTTGACCGAGCACTGTGCTTCTTGTGAGGATGGAGTCCACAGAAGCCGAGCCAGATCCGATCAAACTGAGATCTATCAAGCACCACAGGACATTCACAGTCCCGCAGCAGGACAGGCTGGGGAACTGTAGGAGTGTGAAGGAGTTTGTGAAGCTCAATCGTATTGGTGAAGGAACCTATGGCATCGTGTGGATCCCGATCAGCAGCCTGCGGGAGATAACATTGTTGCTGAAGCTCAGACACCCCAACATCGTGGAGCTCAATGAGGTGGTGGTAGGAAACCACCTAGAAAGTATCTTCCTTGTGATGGGGTACTGTGAGCAGGACCTGGCCAGTCTACTGGAGAATATGCAGTCTCCATTCTCAGAGGCACAAGTGAAGTGTATCGTTCTCCAGCTCCTGAAGGGATTGCTTTACCTGCACGAGAACTTCATTGTCCACAGGGATCTGAAGGTGTCCAATCTGCTCATGACAGACAAAGGCTGTGTGAAGATAGCTGATTTTGGTCTGGCCAGAGCCTATGGTGTCCCCCTCAAACCCATGACTCCTAAAGTGGTGACACTCTgGTACAGAGCGCCAGAGCTACTCCTCGGTACGAAAACGCAAACCACTGCTATCGACATGTGGGCTGTGGGCTGCATCCTAGCCGAGTTATTGGCCCACAAGCCTCTGCTCCCTGGCAGCTCAGAGATCCAGCAGATCGACCTCATAATTCAGCTGCTGGGGACGCCCAATGAAAACATTTGGCCGGGCTTCACCAGGCTGCCTCTGGTGGGGCAGTACACACTGAGGAAGCAGCCCTATAACAACCTGAAGAATAAGTTCACCTGGCTGTCTGAGGCCGGCCTGCTTTTGCGAGTGCTAATCGGCTCCTCTCTTTACAGGGCCGCAGCCAAGGACTCCCTGGAAAGCTCCTACTTCAAAGAGAAGCCATTGCCCTGTGAGCCAGAGCTGATGCCCACGTTCCCTCATCACCGCAACAAGAGGGCCGCCCCTGCTGCTGAGAAACAATCAAAACGCAGCAAGGTGTAAGCCAATCAGGAGCTCAGTGAGGAGGCAACCCGCAACTGCAGCTTCATCCTGTTATTCATTACATCATGGCGGAGTGTCATCGGACAGCTTACTTATACAAGATATGAAGGATACTTATCTGGGTGTGAATTTCCTCTTCTGTACAGGTGGACTGAAGGAACGAGAGATGCGCTCAGCAAGATGGGATTACCAGCACCATGCAGCTTGGAAAACAATGTGTTGTGAGAGAAGTCATTTTGTTTACCAGCTATGTTTTCAGTAATCGATTTATTAGAAAACTAAAACAGGGATTCATTTGGACTGGAGAAGCTctacaatatgtacaatatatggATCTCAAGGACTGGACCAATTccaatgtttttgttaaattacatttattttttttgcaaggcTACCATCATTCCAATAATTGATGTCAAAATGCCACCATGTGTGATCTTTGCTTCTGATGAACAGTAATGGAAAGTGTATGTATGCACAGTATTATATAGTCTCCCAAAGGAAACCTCACGAGCCTGAAGACAAGTTAAGTGAAGAATATATGCGTCTGTTTGGAAACTAAGATTTTACTGCCAAAAGCCATAGACtgacatgatgatgatgagggtAGTATAGAGTATTATACTGACCACAAGATCACAGGAGTTTGGGTTCAGTGTGGATGATGCAGTTGTCTTTGCTTTACCCGGGTCAAGTTGGCAGTATTTCCTATAATGGAGTCCCATTCACAGGGGAGTCAGACCCTCTCTGTACATGCAGCGCTGCAGAGCCCAGGAAAAACATCGGATCTGTGCCACACTTAGGCTGACAAATTGCTTTCCCTCTGTCAGATGTGCACACTTGCACTAGGCTTTCCATAAATATAGAAGACATGCTGAATATCTCCAATGTGAAACCTCTTGCTGGCTACTCTTCTTTAAATGCTGCACATGTTCCTTGGGTCAGTTACAAGACTCAAGAGCCACAGGCTTGGTTTTCATAGCTGAAGGGATCACTTTTCTGGCAGACTCATGGCTGGACAGAATCTGCatcttgaaaaacagaaaatttaataaaaaaacattttttttattttaaatacaagcaCATGCTGAGATTTGACTTTGGTTAGCACTGGTGTATATCCTTGTCTGATTGGAGTACActttttctcattaaaaaggGAACAGTTTAGCAAACATTCTCTACTTCTTCCATAAGAAATGGCATCGGAGGGGAAATACCCATAGTACATTTGCATACAATTGAGCTGTAGCCATATTAATTGTACATTGTAACTTTTGTATCCATGGGTGAAATATCAGCCTTTGAAATGAGTGTTTGCTTCAGTTCTTGCCTGCTGTACAAGGCCAAGACACTGGAGGGACAGCTCTGtttgtctgctctgttttttgTGCTTGTAAATGAAGGCTGTATTCTCACAGTCAGCTGTGGAACCGTTTTGGGAAAAAAAGGGGATCTCAATTGTACATCAGCTAACTCTACAGTAGATTGCTCCGTTATTCCTGATGGTAATAATGTAACTGCAATTCTGCAAGTGTCTgtttggggagggggtggggatggCACCAaacagtgtgtgtatacagtgaggga

Function

symbol description
cdk10 Enables kinase activity. Acts upstream of or within histone phosphorylation; negative regulation of neuron apoptotic process; and neurogenesis. Predicted to be active in nucleus. Is expressed in brain; eye; liver; and pleuroperitoneal region. Orthologous to human CDK10 (cyclin dependent kinase 10).

NR:

description
PREDICTED: cyclin-dependent kinase 10 isoform X2

GO: NA

KEGG:

id description
K02449 CDK10; cyclin-dependent kinase 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020600 True 2744 mRNA 0.46 13 25579705 25588751

Neighbor

gene id symbol gene type direction distance location
AMCG00020596 NA coding upstream 47342 25531176 ~ 25532363 (+)
AMCG00020593 NA coding upstream 87410 25487947 ~ 25492295 (+)
AMCG00020586 wwp2,LOC107740243,LOC108439047 coding upstream 121610 25405634 ~ 25458095 (+)
AMCG00020588 NA coding upstream 186844 25376181 ~ 25392861 (+)
AMCG00020587 wwp2 coding upstream 209970 25366849 ~ 25369735 (+)
AMCG00020599 NA coding downstream 12369 25601120 ~ 25610390 (+)
AMCG00020598 znf276,zgc:158366 coding downstream 92865 25681616 ~ 25687176 (+)
AMCG00020609 snta1,LOC107560074,LOC107728410,LOC107667670,LOC107744389 coding downstream 193297 25782048 ~ 25783248 (+)
AMCG00020608 sntb2,LOC106573669,LOC106560900 coding downstream 221415 25810166 ~ 25811675 (+)
AMCG00020606 sntb2 coding downstream 250953 25839704 ~ 25854564 (+)
G64378 NA non-coding upstream 7943 25569390 ~ 25571762 (+)
G64362 NA non-coding upstream 43658 25535753 ~ 25536047 (+)
G64300 NA non-coding upstream 246023 25332259 ~ 25333682 (+)
G64297 NA non-coding upstream 249147 25330081 ~ 25330558 (+)
G64269 NA non-coding upstream 313498 25263406 ~ 25266207 (+)
G64394 NA non-coding downstream 51842 25640593 ~ 25643374 (+)
G64406 NA non-coding downstream 133182 25721933 ~ 25728334 (+)
G64436 NA non-coding downstream 230640 25819391 ~ 25819782 (+)
G64457 NA non-coding downstream 305399 25894150 ~ 25895525 (+)
G64478 NA non-coding downstream 346154 25934905 ~ 25940113 (+)
G64372 NA other upstream 26385 25550911 ~ 25553320 (+)
AMCG00020585 NA other upstream 106819 25459096 ~ 25472886 (+)
AMCG00020573 NA other upstream 494832 25078142 ~ 25084873 (+)
AMCG00020572 NA other upstream 503015 25062373 ~ 25076690 (+)
G64046 NA other upstream 1097591 24478835 ~ 24482114 (+)
AMCG00020603 NA other downstream 173384 25762135 ~ 25778982 (+)
AMCG00020621 LOC105904655 other downstream 466536 26055287 ~ 26096957 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other downstream 1827245 27415996 ~ 27418520 (+)
G64887 NA other downstream 3284879 28873630 ~ 28874072 (+)
G64908 NA other downstream 3419912 29008663 ~ 29009601 (+)

Expression


Co-expression Network