G64046


Basic Information

Item Value
gene id G64046
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 24478835 ~ 24482114 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80130
TTATTAGAAGAcatgtttaaatcattttctgaGGCATGAACTTCTCCCTTGTCCTGTGCCTCCGTCTGCAAAGCTGCGCCAGGTTACTATACACAGATCAGTAACCAATAAACAATACAGCATTAAAGTCCTGGTATAGATTGTGTTACAACAGTTCAGAACATGGGGCGAAGAGTTAGtctgtataaaaaaaagaaaagttcacTGGTTTGTACTTAGAAGGGATGGGACAGCACCTCATTAgggccatttaaaaaaaaaaaaaaacgtttttgtccaatgacaaaataaacaaatggaaagtCTAATGTATTCAGTTGAACCtagacaaacatttttttatttctctgcaattaaaaaaggcaCAAACAGGAGTAAGATTAACTTTTTTGTCCAGTATTTTCCAACACCATTAGTCGTTTAGAAAAGGGAAATATGTCGCATTCCTTGTAAGTCAGACAACCACACATTTGTTCgttgtgaaataataatgaagaaaacaaacaatcaaacaaagcaATGAACTCGTAAAGCCTGTGTCCAGTCCTTTCTGAGGGAATAACAGGCATGAGCTGGTGAAAAGTTGCTCATTGTCCTGCAAGGACCAGGAAAGGCCACAGCCaatgaaagcaatacaaacCACCAGCAAGTCAGTCAGCTCACTGTGGTTCAGATTTATGTTCATCGTAATAGACCTTGACCATGGCATGTGACACCTTTACCACTTTCTTTTCCTTGGCGTCAGGGCCCATATTCACCCTGGCAAGTTTCAGCCAGTACTGTTCTGTCCGGCTCTCATAGTCAGGGTATGATTCTCCCGCCTTGACAGGAGGATGATCCTCgtCTTCTTCTTCGCTTTCTTCATCAGAACTCTCTTCATCCTCTTCCTCATCATTCCCACCTATTGCACCCTCAGCCTCTTCACCCTCCTCCTCCGATTCAGTCTCCTCCAACCACTCCTGCGTTTTGGGATCCATCTCCACGAGAACCTTCCATTCGTCCATCTTGTGCAGGTCGATGGCGTAGAGATCATTGAGCGTGAACTGGCGATCTCCCACTTCGAACATCCCCCCATACAGATACAGCAGCCCGTTCTTCACTGTGGCCATGGCGTTGGAGCGAGGGCAGGGCTCCACTGAGGCAGCTGCGGCACCTTCCCCTTcatcctcctccccctcctcctcctcactgtcCGAGGACGGTGTCCCAGCCCCTGGGTTGGGGATCACCTGCTTGATGGTCATGACCGTCCCGTCATCAGCCACGATTTCTTTCACCACCTCCACTGGCGCctgcccctcctcctcctctcccttctGATCCTGCCCCAGCTCAGCTCCCTCTCCATCACCCTTCTTCCCCCTGCGTCGTTTCTTTTTCTCTGACTTGGGACACTTTAATAAAAGGCACACGAGAGCATTAAAATCGTTCACATTTGGCCTTTATCAGTCACTGGTAAATTAATCGGGaacactattttaattttattccagAGCTCCAAAATCATCTATtataaatgttctgttttgcattttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80130 True 1540 TUCP 0.45 3 24478835 24482114

Neighbor

gene id symbol gene type direction distance location
AMCG00020543 NA coding upstream 25235 24447276 ~ 24453600 (+)
AMCG00020537 map1lc3b,LOC107701564,LOC107714047,LOC107654145,LOC107581828 coding upstream 134900 24330886 ~ 24343935 (+)
AMCG00020531 clec3a coding upstream 170675 24304634 ~ 24308160 (+)
AMCG00020533 vat1l,LOC106562097,LOC106587190 coding upstream 207802 24251075 ~ 24271033 (+)
AMCG00020532 NA coding upstream 229584 24245541 ~ 24249251 (+)
AMCG00020552 NA coding downstream 131759 24613873 ~ 24619867 (+)
AMCG00020553 NA coding downstream 140430 24622544 ~ 24630704 (+)
AMCG00020551 NA coding downstream 157684 24639798 ~ 24641669 (+)
AMCG00020556 csnk2a2,LOC106573643 coding downstream 194575 24676689 ~ 24688415 (+)
AMCG00020562 NA coding downstream 224321 24706435 ~ 24707136 (+)
G64009 NA non-coding upstream 236158 24232739 ~ 24242677 (+)
G63951 NA non-coding upstream 385598 24088514 ~ 24093237 (+)
G63948 kars,LOC107738348,LOC107584690,LOC107679917 non-coding upstream 402360 24075049 ~ 24076475 (+)
G63947 NA non-coding upstream 406675 24070716 ~ 24072160 (+)
G63898 LOC108433019,LOC103398424 non-coding upstream 579081 23898507 ~ 23899754 (+)
G64048 NA non-coding downstream 6790 24488904 ~ 24565492 (+)
G64069 NA non-coding downstream 112016 24594130 ~ 24597787 (+)
G64121 NA non-coding downstream 209883 24691997 ~ 24695554 (+)
G64122 NA non-coding downstream 214488 24696602 ~ 24696809 (+)
G64158 NA non-coding downstream 327850 24809964 ~ 24811811 (+)
AMCG00020529 LOC107090538 other upstream 410378 24033037 ~ 24068457 (+)
G63939 NA other upstream 423243 24051989 ~ 24055592 (+)
G63786 znf821,LOC107747380 other upstream 1403890 23070411 ~ 23074945 (+)
AMCG00020505 NA other upstream 1416686 23053798 ~ 23062149 (+)
AMCG00020487 NA other upstream 2069342 22356174 ~ 22409493 (+)
AMCG00020572 NA other downstream 580259 25062373 ~ 25076690 (+)
AMCG00020573 NA other downstream 596028 25078142 ~ 25084873 (+)
AMCG00020585 NA other downstream 976982 25459096 ~ 25472886 (+)
G64372 NA other downstream 1068797 25550911 ~ 25553320 (+)
AMCG00020603 NA other downstream 1280021 25762135 ~ 25778982 (+)

Expression


Co-expression Network