AMCG00020551


Basic Information

Item Value
gene id AMCG00020551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 24639798 ~ 24641669 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020551
ATGACGGAGGCATGGCAACAGCATGCTGTAGCCCCTCCCCCCGTCGTTCACACCATCCCACCCGGAGCAGAGAGTGCGCTGGGCTGTGCGGTCTATGGTATCGTCCTGCAGCCGGACCCTGccttgcagcagcagcagcagcaacagcatcaccaacagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcacgcGGCCCAGGCACAGCAGCCCTCCATGCAAGTTGGAGAAGGAGGACACAAGTGTGGGGCCTGTGGCCATGATATCTCGCACCTGGCCAACCCTCACGAGCATCAGTGCATGGTGAGTCAGGATCGCTCTTTCCAGTGCACGCAGTGCCTAAAAATCTTCCACCAGGCCACCGACCTCCTGGAACACCAGTGTGTCCAGGTAGAACAGAAACCCTTTGTTTGTGGGGTGTGTAAGATGGGTTTCTCACTTCTCACATCTCTAGCTCAGCACCATAATGCTCATAGCAGCAGCAATCCCATGAAGTGCTCTATATGTGAGAAGACCTATCGACCCAACTCTGCAGGGGCAGGAAATGCCACCCCTACGCCTTCTGCTGCCAATCCCCAACAGCCCTCTGCAGAAGCCGCAGACAGAGCAGGGGCTGTAGTTGGGGCTTCAGCCAGCGGAGGAGCCGGGGGGGTTGTGTGCGAAGAGTGCCAGATGAGCTTCAAACAGCAGTACGCCCTGGTTCGCCATCGCCGCACCCATAAAACCCATGACCGTCCCTTCAAATGCAATCTGTGTGACAAAGGCTTCCTGCAGCCCTCCCATTTGCTCTACCACCAGCACGTCCATGGGATTGAGAGTCTCTTTAAGTGTGCCTCCTGCCAGAAGGGTTTCAGCCAGTCCGGGGATCTCCTGCGACACAAGTGCGGCGGCGCAGCATCAGCGATGACCGCTGCCGATCGGCCCTACAAGTGTGACGTCTGTGGGAAGGCCTACAAAAAATCATCCACCCTCCAGCGGCACCAAAACTCCCACTGTGCCGAGAAGCCCCTCAAGTGCACGCTCTGCGACCGGCGCTTCCTGTCATCCTCAGAGTTCGTGCAGCACAGGTGTGACCCGGCCCGCGAGAAGCCCTTGAAATGCCCGGATTGCGAGAAGCGGTTCAAGTACTCATCTGACCTTCAGCGCCATCGCCGAGTGCACACAGGAGAGAAGCCCTTCAAATGCCCCAGCTGTGACAAAGGCTTCAAGCAAAGGGAGCACCTGGCCAAACACCAGAGCGTGCATGCCCGGGAGGCCCAATTTAAGTGCGTCTGGTGCGGAGAGCGGTTTGGGGACCTTGGGGCGCTGCAGGAGCACACAGTTCAGCACACAGCTGAGGGAGGTGGATACCCTGTGCCGCCTTGTATACAGTAA

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020551 True 1395 mRNA 0.59 2 24639798 24641669

Neighbor

gene id symbol gene type direction distance location
AMCG00020553 NA coding upstream 9094 24622544 ~ 24630704 (+)
AMCG00020552 NA coding upstream 19931 24613873 ~ 24619867 (+)
AMCG00020543 NA coding upstream 186198 24447276 ~ 24453600 (+)
AMCG00020537 map1lc3b,LOC107701564,LOC107714047,LOC107654145,LOC107581828 coding upstream 295863 24330886 ~ 24343935 (+)
AMCG00020531 clec3a coding upstream 331638 24304634 ~ 24308160 (+)
AMCG00020556 csnk2a2,LOC106573643 coding downstream 35020 24676689 ~ 24688415 (+)
AMCG00020562 NA coding downstream 64766 24706435 ~ 24707136 (+)
AMCG00020558 NA coding downstream 94305 24735974 ~ 24737900 (+)
AMCG00020557 NA coding downstream 105754 24747423 ~ 24756285 (+)
AMCG00020563 ldhd coding downstream 159648 24801317 ~ 24809266 (+)
G64069 NA non-coding upstream 42011 24594130 ~ 24597787 (+)
G64048 NA non-coding upstream 74306 24488904 ~ 24565492 (+)
G64009 NA non-coding upstream 397121 24232739 ~ 24242677 (+)
G63951 NA non-coding upstream 546561 24088514 ~ 24093237 (+)
G63948 kars,LOC107738348,LOC107584690,LOC107679917 non-coding upstream 563323 24075049 ~ 24076475 (+)
G64121 NA non-coding downstream 50328 24691997 ~ 24695554 (+)
G64122 NA non-coding downstream 54933 24696602 ~ 24696809 (+)
G64158 NA non-coding downstream 168295 24809964 ~ 24811811 (+)
G64185 NA non-coding downstream 303592 24945261 ~ 24946210 (+)
G64210 NA non-coding downstream 416500 25058169 ~ 25060329 (+)
G64046 NA other upstream 157684 24478835 ~ 24482114 (+)
AMCG00020529 LOC107090538 other upstream 571341 24033037 ~ 24068457 (+)
G63939 NA other upstream 584206 24051989 ~ 24055592 (+)
G63786 znf821,LOC107747380 other upstream 1564853 23070411 ~ 23074945 (+)
AMCG00020505 NA other upstream 1577649 23053798 ~ 23062149 (+)
AMCG00020572 NA other downstream 420704 25062373 ~ 25076690 (+)
AMCG00020573 NA other downstream 436473 25078142 ~ 25084873 (+)
AMCG00020585 NA other downstream 817427 25459096 ~ 25472886 (+)
G64372 NA other downstream 909242 25550911 ~ 25553320 (+)
AMCG00020603 NA other downstream 1120466 25762135 ~ 25778982 (+)

Expression


Co-expression Network