AMCG00020752


Basic Information

Item Value
gene id AMCG00020752
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32234154 ~ 32244478 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020752
CTGGGGCCGGACAGCGCATTTGTGCGGACTTTACATTGACATATCTGGAGCCGGCTGCTTCAAATCTACAAACACACGGACGGGTCGCGgagagacggacagacggacagacagacacgggCCTGGACAGACGGGTAGAAAGGTGCAGACAGACTGatagacagacggacagacagacagcgaTGAAGAGAGCTCTGTGTGGACTGGTGTTCCTCGCTGCTCTCTGCTGCTCCCTAGGGACAGAGatgagCCACAGGCGGAGCCGCAGAGGGACTCGTGTGTTCGGAGAGCGCTGTATGGATGATCAGCAGAGATCAATGCACGGGCACGGGGACACCTGGCTGCGCTGGCAGGGTCAGCGGGTGGAGTTCTGCCGCTGTGCCCGTGGGATGACACGGTGTCACGCGGTGCCAGTCATCAACACGGAGGAGAAGTGTGCGACGGGCCGAGGCGTGGGGTACCGGGGCACATGGGCCGTAACCCGTTCGGGGGCCAACTGCATCAACTGGAATGCCACAGCCCTGGTAGTCAAGAAGTATCACGCCCGCCTGCCCAACAGCGCCACCCTGGGGCTGGACAACCACAACTACTGCAGGAACCCCGACAACGACACCCTGCCGTGGTGCTACGTGTACAGCGGCGTGCAGCTCACCTGGGAGCACTGCAGCCTGCCCGCCTGCCAATCAGGGTCATGTGGAGTGAGGGAGCCAGCCCTGAGGCGTCAGTTTCGGATCAAAGGCGGATCGGTGTCTGACATCACCGCACACCCCTGGCAGGCGGCCCTCACAGTGTACAGCCCCCGTGCCAAAGACTACAACTTCTTCTGCGGCGGCATGCTGATCGACTCCTGCTGGGTCGTGTCCGCCGCCCACTGCTTCGATGAGGGGTTTGAGGTCAGCCGGTTGCAGGTGGTGCTGGGCAGGACGTTCCGTCTAGAGAACTCGTCCAGCGAACAGCTGTTCTCCGTGCAGCAGTACTGGTGTAGTGTGTTAAcccgtctctctctgtttttagTGCTGCTGAAGCTGCAGAGCACCGATGGGCTGTGTGCCATTGAGACCCCCTCAGTGCGGCCGGTCTGTCTGCCCTCACCTGACTTCAAGCTGCCCGACTGGACAGAGTGTGAGATCTCAGGCTACGGAAAAGAGCAGGAGTTCTCTGCGTTCTACTCATTGCGCCTGAAGCAGGGGCAGGTGCGGCTGTGGCCGGACGCACAGTGCACATCTGATCGGCTGGACAACCGGCTGGTCACTCAGAACATGCTGTGTGCCGGAGACACGCGTGGACTGGACGACGCCTGCAAGgggGACTCGGGTGGGCCGCTGGTTTGCCCCCAGCCCAGTGACGGCCGCATGGTCCTGATGGGCGTGATCAGCTGGGGTGACGGCTGTGGGAAAAAAGACACACCCGGAGTCTACACACGTGTTACACGCTACATACAGTGGatcaacacacacattcagacacaCTCCCgttgagacacagagagaaagaaacagacataggtaaacaccacacacacacacacacacacacacacacacacacacacacacacagaccaggcCCACTGCAGACTAGCACAACAGTATCTGCTGGAACAGATTTTCACACTCACTCtaacacactcccacacacacactcccacagcCCTGGTGCACACGTGTGGATGGGCTTCTCACTCTTTGTACCTATAAGCAGCTGTGCaatttttgtataaaattatatttaaatacaaatcagtaaGTGAATATATTTATGGAGACTATTGCTGTTTTATACCTTGAACTGGAACAAAACCAGCATGAAGAACTTAAAAAGCATAGAACTGTAATTAttgctcattattattattattccttatttatttttaagtactgTATTTAACCTACTGCTTTTTTACATAGGGTCCATACtggtaatttaattttgtatatttttatattattattttgtgtttttttgtaacacaaggactgttttaataaaaattgactgttcacac

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K01343 PLAT; tissue plasminogen activator

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020752 True 2005 mRNA 0.54 11 32234154 32244478

Neighbor

gene id symbol gene type direction distance location
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding downstream 21661 32188550 ~ 32212493 (-)
AMCG00020743 NA coding downstream 95247 32123391 ~ 32138907 (-)
AMCG00020744 wdr45,LOC102779567 coding downstream 124738 32104730 ~ 32109416 (-)
AMCG00020745 NA coding downstream 151087 32071201 ~ 32083067 (-)
AMCG00020739 NA coding downstream 195999 32024322 ~ 32038155 (-)
AMCG00020753 NA coding upstream 22668 32267146 ~ 32269733 (-)
AMCG00020757 NA coding upstream 45418 32289896 ~ 32291454 (-)
AMCG00020758 NA coding upstream 123640 32368118 ~ 32369718 (-)
AMCG00020764 NA coding upstream 129610 32374088 ~ 32378924 (-)
AMCG00020761 slc23a2,LOC107394182,LOC108440813,LOC106585070 coding upstream 140612 32385090 ~ 32396520 (-)
G65468 NA non-coding downstream 18397 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 46443 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 172857 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 430362 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 475654 31757451 ~ 31758500 (-)
G65571 NA non-coding upstream 270925 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1029698 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1561223 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1587257 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1716699 33961177 ~ 33962191 (-)
AMCG00020746 NA other downstream 111221 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 821331 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1425308 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1496178 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1703018 30449745 ~ 30531136 (-)
G65549 NA other upstream 113760 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 310382 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 363384 32607862 ~ 32610708 (-)
G65641 NA other upstream 410656 32655134 ~ 32657019 (-)
G65679 NA other upstream 641886 32886364 ~ 32891493 (-)

Expression


Co-expression Network