AMCG00021271


Basic Information

Item Value
gene id AMCG00021271
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13575748 ~ 13580652 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021271
ATGTTCAACCTTGTGAGCAACTGCTGCAGCTGGATACAGAAACTCCAGCAGCCTGTCCGGAAAGCTACTGTGCTAATGGTTGGCCTTGACAAATCTGGAAAAACATCCACTATTAGAGGAATTGTGAAAGCCCCCCCCGGGGAGGTGAGCCCCACTGTGGGCTGCGTACGGACTGAGCTCCGAGTGGACAGCTTCCAGGTCACCCTGCTGGATGTGGGTGGAGGGGCAGATGTTCGTGGGGCTTGGAGGGACCACTACGGTGCGGCCCATGGGATCATCTTTGTGGTGGATTCCAGTGACACCCAGAGGATCCGGGAATCCAGAGATCTGTTGATGGACCTGTTGAAGCACTCCAAGGTGGCAGGCAAGCCCCTTCTGGTGCTGGCCAATAAACAAGACAAGATGAATGCTTTGCTGGGTAGTGATCTCATAGAGGCCCTGTCCCTTGAGAAGCTGGTCAACAAGAGTCGGTCCCTCTGCCACATTGAGCCATGCTCTGCTCTGCTGGATGTACGGAGGTGGTCTGAGAGAAAGACTCTGAGAGGCCTCCGCTGGCTCCTTCGTGCAGTCTTTCTTGATTACAGCGAGCTGTGTGCGCGTGTGGCAAGAGACAATGCCCAGCTGCCCAGCcaagaggagaaagagaggcgTGGGAAAGCAGAACGAGGACGCAGCAAGCCCCAGGAAGACAGGCTTCCCACCAGCAGAACAGCGCTACCGAAGGACGATTCTGCTCAAGCCAAAGAGAAGAAGCCTCTGCCCAATGGAAAACTCGAGCCCATTCGGAACATCCTGAAAACGGAAAGCGATCTGAAAAGGagggcaaaaaagaaaaagcatgtgAAGATAAAGGATGCAGTGAAAGGCAACGTGCAGTCGCATGGCGAAAAGCCGGAGCAAGATCCAGAGTCAAATGGACAAAAGGAGGGTAAAGCCGGAAGTGCCACCATCACCCTTTTAACTAGCAACCGGGTGGGACTCAACCGGAGTGTCAGATTCACCAAGGAGAGCCTGGAGCTGCCAGACTCGCCCGAGAATGAGAGATCCAAACTGAAGAAA

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021271 True 1059 mRNA 0.54 7 13575748 13580652

Neighbor

gene id symbol gene type direction distance location
AMCG00021273 NA coding downstream 7920 13566358 ~ 13567828 (-)
AMCG00021269 tmem35,tmem35a,LOC107740187,LOC107680989,LOC107724834 coding downstream 14335 13557156 ~ 13561413 (-)
AMCG00021272 NA coding downstream 20051 13545630 ~ 13555697 (-)
AMCG00021270 drp2,LOC106611717 coding downstream 87007 13455243 ~ 13488741 (-)
AMCG00021274 LOC106604457,LOC108231309,LOC102198838,LOC103366979 coding downstream 134605 13438742 ~ 13441143 (-)
AMCG00021278 cstf2 coding upstream 31790 13612442 ~ 13622612 (-)
AMCG00021289 NA coding upstream 97130 13677782 ~ 13679075 (-)
AMCG00021286 LOC107378166 coding upstream 100251 13680903 ~ 13691172 (-)
AMCG00021291 NA coding upstream 125209 13705861 ~ 13713994 (-)
AMCG00021287 LOC106611794 coding upstream 137321 13717973 ~ 13724648 (-)
G84822 NA non-coding downstream 912429 12663009 ~ 12663319 (-)
G84812 pcdh19 non-coding downstream 1072246 12500240 ~ 12503502 (-)
G84785 NA non-coding downstream 1372921 12198777 ~ 12202827 (-)
G84780 aifm1 non-coding downstream 1432385 12141960 ~ 12143363 (-)
G84778 NA non-coding downstream 1442591 12131302 ~ 12133157 (-)
G85003 NA non-coding upstream 170554 13751206 ~ 13755469 (-)
G85009 NA non-coding upstream 255935 13836587 ~ 13837073 (-)
G85012 NA non-coding upstream 277652 13858304 ~ 13862544 (-)
G85044 NA non-coding upstream 349190 13929842 ~ 13930281 (-)
G85058 NA non-coding upstream 385284 13965936 ~ 13966910 (-)
AMCG00021259 diaph2 other downstream 774162 12719864 ~ 12801586 (-)
G84814 NA other downstream 1048054 12527093 ~ 12527694 (-)
AMCG00021249 NA other downstream 1474894 12093477 ~ 12100854 (-)
AMCG00021153 NA other downstream 6453257 7115420 ~ 7122491 (-)
G83864 NA other downstream 7029171 6544492 ~ 6546577 (-)
G84952 NA other upstream 46683 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 289287 13869939 ~ 13917868 (-)
AMCG00021302 NA other upstream 367655 13948307 ~ 13951044 (-)
G85115 NA other upstream 469322 14049974 ~ 14051897 (-)
AMCG00021304 NA other upstream 477266 14057918 ~ 14071325 (-)

Expression


Co-expression Network