AMCG00021673


Basic Information

Item Value
gene id AMCG00021673
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24553017 ~ 24568180 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021673
AACAACCCAAGACCTGTGAACTACCAGTTTCAGCAGAATTTAGACTACTACAAGACTCGTGGGGCAGATCTGATGAGTAAGACTAGAGCCAGAGCCAGCGCCGCCCCCCTCAACATCAACAAGGTCTCGAGCAGCCTGCTGAACTTCGGCCGCAAGCTCATCTCCCCCGCCATCTCCATCAACGCGAGCGGTGGCCCCCCAGTTGGCAGCGACGCGGGCTTTGCTCCCCCCCAGGCTGTGGGCCGCTCCCTGGCCGAGCCCCCCGCCACCGCACCGCAGTCCCAGCTGCCTCCTCTGCAGCACCAGCAGACGCAGCACCACCGGCTGCTGAAGTCAGAGAGCATGCCTGTGCACCTCAGCAAAGGTGGCGGTGCGCACGTCTCTATTCCTGTCCAGACTGTAACTGACATCCAAGGCCAAATCTCCAGGAACATGAGCTCCTCTCCCAGTATCGAGAGTCTGCCAGGAGGACACGACCACACGGCTTCTCCACCTTTATCTGCTACCAAGAAGGACTCCTTTTTCAATATCTCTCGATCCCGCTCTCATAGCAAAACCATGGGCAAGAAAGAATCTGAAGAGGACCTGGAGGCCCAGATCTCATTTCTGCAAGGGCAGCTCAATGACCTGGAAGCCATGTGCAAGTACTGTGCGAAGATGATGAACGCACACATCGGCAAGATTCAAGATGTCATTTTGCAGGAGCATCTGGAAAAAGAAGACGAGGTTCTCGTGTCACTTGCCGGACTCAAGCAGATTAAGGACATTTTGAAAGGGTCCCTGCGCTTCAACCAGAGCCAGCTGGAGGCTGAGGAGAACGAGGAGATCACCATCGCCGACGATCACTACTGCTCCAGCGCCCAGACGGGCAGAGACAGGGTCGGGCACAAGGACCTCGGCCGAGAGAAGTCCCTCTCCCTCCGCAACAAGCAGgccaCGTCAGTCTCCTCTCTAAACTCCGAGGGCCGCAACTCCGATGACTACATCCTGATCTCCCAAGACGACGGCATCGAACAGGCTCCGGATGAGAAGAGAGAGGCGCTGGCCCCGGCGGCGAAGCCCCCTCATTTCGAGAAGGGCGAGAAGGCGACCCCAAAACCCGAGAAAGAGGCTCCCCCCGCGGCCCCCTTCCCGGATCCCCTGATGAGCGCAGCCTCCATCTCCAGCACCTCCGGCTCCAGCCCCGATGAGGACAGCAGCAACGGAAAGGACTCGGACTTCACGATAGTCAACCCCATGGACATCTGA

Function

GO: NA

KEGG:

id description
K18469 TBC1D5; TBC1 domain family member 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021673 True 1248 mRNA 0.58 8 24553017 24568180

Neighbor

gene id symbol gene type direction distance location
AMCG00021670 NA coding downstream 107779 24436207 ~ 24445238 (-)
AMCG00021669 NA coding downstream 140569 24382037 ~ 24412448 (-)
AMCG00021667 NA coding downstream 183894 24366725 ~ 24369123 (-)
AMCG00021666 ankrd28 coding downstream 245946 24279592 ~ 24307071 (-)
AMCG00021663 NA coding downstream 275421 24261901 ~ 24277596 (-)
AMCG00021674 NA coding upstream 26717 24594897 ~ 24609459 (-)
AMCG00021675 LOC107716986 coding upstream 198605 24766785 ~ 24802333 (-)
AMCG00021677 NA coding upstream 407088 24975268 ~ 24986960 (-)
AMCG00021679 NA coding upstream 439510 25007690 ~ 25012760 (-)
AMCG00021680 LOC104951919 coding upstream 506167 25074347 ~ 25085082 (-)
G87573 NA non-coding downstream 4894 24546082 ~ 24548123 (-)
G87495 NA non-coding downstream 273630 24278637 ~ 24279387 (-)
G87428 LOC103376870 non-coding downstream 419706 24080736 ~ 24133311 (-)
G87427 NA non-coding downstream 475910 24076899 ~ 24077107 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 1064805 23482972 ~ 23488212 (-)
G87627 NA non-coding upstream 419262 24987442 ~ 24989739 (-)
G87622 NA non-coding upstream 420221 24988401 ~ 24994242 (-)
G87694 rpl15 non-coding upstream 844224 25412404 ~ 25460562 (-)
G87707 NA non-coding upstream 963293 25531473 ~ 25531759 (-)
G87717 NA non-coding upstream 1089202 25657382 ~ 25657793 (-)
AMCG00021668 NA other downstream 189558 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 342812 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 1054256 23495025 ~ 23498761 (-)
G87263 NA other downstream 1214533 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 1220049 23329325 ~ 23332968 (-)
G87674 NA other upstream 835470 25403650 ~ 25406538 (-)
G87806 NA other upstream 1337264 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 1523047 26091227 ~ 26105391 (-)
G87871 NA other upstream 1583925 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 2105898 26674078 ~ 26718508 (-)

Expression


Co-expression Network