AMCG00021681


Basic Information

Item Value
gene id AMCG00021681
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25202404 ~ 25203901 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021681
ATGAAGAGCCCCCGATCTCTCAATGACGGAGCGGCATCAGAGATCCACAATGGGCTGTCTGCGGGGACAGACGAGGGGAGTGAGCAGCCCAGCCTGACCCTGTGTGAAATGTGTAACATCCAGCTGCACTCTCCTGCTCAGGCACAGATCCATTATAATGGGAAGTCACACATGAAGAGAATAAAACTGCTGAATAATGGGCATGCCTCAGCTGAAAAAGTTGATATTCTGCAGACCGAACCAGCTGTGGAGATTGCTATCACGAGCCAGTCCTGCAGATGGCAATGGTGA

Function

GO:

id name namespace
GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator biological_process
GO:0005634 nucleus cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021681 True 291 mRNA 0.52 2 25202404 25203901

Neighbor

gene id symbol gene type direction distance location
AMCG00021680 LOC104951919 coding downstream 117322 25074347 ~ 25085082 (-)
AMCG00021679 NA coding downstream 189644 25007690 ~ 25012760 (-)
AMCG00021677 NA coding downstream 215444 24975268 ~ 24986960 (-)
AMCG00021675 LOC107716986 coding downstream 400071 24766785 ~ 24802333 (-)
AMCG00021674 NA coding downstream 592945 24594897 ~ 24609459 (-)
AMCG00021686 nkiras1,LOC106588667 coding upstream 202801 25406702 ~ 25411562 (-)
AMCG00021691 top2b,LOC106570304 coding upstream 478869 25682770 ~ 25704828 (-)
AMCG00021690 NA coding upstream 501675 25705576 ~ 25713766 (-)
AMCG00021696 NA coding upstream 515456 25719357 ~ 25799664 (-)
AMCG00021695 NA coding upstream 669990 25873891 ~ 25884232 (-)
G87622 NA non-coding downstream 208162 24988401 ~ 24994242 (-)
G87627 NA non-coding downstream 212665 24987442 ~ 24989739 (-)
G87573 NA non-coding downstream 654281 24546082 ~ 24548123 (-)
G87495 NA non-coding downstream 923017 24278637 ~ 24279387 (-)
G87428 LOC103376870 non-coding downstream 1069093 24080736 ~ 24133311 (-)
G87694 rpl15 non-coding upstream 208503 25412404 ~ 25460562 (-)
G87707 NA non-coding upstream 327572 25531473 ~ 25531759 (-)
G87717 NA non-coding upstream 453481 25657382 ~ 25657793 (-)
G87719 NA non-coding upstream 473082 25676983 ~ 25677417 (-)
G87720 NA non-coding upstream 474286 25678187 ~ 25681020 (-)
AMCG00021668 NA other downstream 838945 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 992199 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 1703643 23495025 ~ 23498761 (-)
G87263 NA other downstream 1863920 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 1869436 23329325 ~ 23332968 (-)
G87674 NA other upstream 199749 25403650 ~ 25406538 (-)
G87806 NA other upstream 701543 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 887326 26091227 ~ 26105391 (-)
G87871 NA other upstream 948204 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 1470177 26674078 ~ 26718508 (-)

Expression


Co-expression Network