G85993


Basic Information

Item Value
gene id G85993
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17509085 ~ 17509295 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107332
CCTGCCATAAATACAGCATTTGAATTGCTAAAGACCTACACCTGTGGTTACAgctttactgtttttaattcagtgctgcccaaacccaaTCCTCAAgggcccctatccagcaggttccctttcaagtcgaaagacagccattaccgaatgggaagagccttctgacccaTCAATCAGTGAAAACTTGTACccaagctgcccaataggggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107332 True 211 lncRNA 0.47 1 17509085 17509295

Neighbor

gene id symbol gene type direction distance location
AMCG00021440 znf711,LOC107569605,LOC107684921,LOC107746145 coding upstream 1955 17494793 ~ 17507130 (+)
AMCG00021439 NA coding upstream 16426 17483091 ~ 17492659 (+)
AMCG00021442 NA coding upstream 72487 17430466 ~ 17436598 (+)
AMCG00021443 NA coding upstream 80882 17427517 ~ 17428203 (+)
AMCG00021436 NA coding upstream 89263 17404018 ~ 17419822 (+)
AMCG00021451 NA coding downstream 523896 18033191 ~ 18050404 (+)
AMCG00021450 NA coding downstream 552326 18061621 ~ 18067774 (+)
AMCG00021453 NA coding downstream 599783 18109078 ~ 18112221 (+)
AMCG00021454 cetn2,LOC108436166,LOC107710936,LOC107663123 coding downstream 658552 18167847 ~ 18170544 (+)
AMCG00021455 NA coding downstream 667885 18177180 ~ 18188162 (+)
G85992 NA non-coding upstream 2 17507526 ~ 17509083 (+)
G85976 NA non-coding upstream 49144 17459493 ~ 17459941 (+)
G85941 NA non-coding upstream 210272 17298159 ~ 17298813 (+)
G85903 NA non-coding upstream 421291 17086752 ~ 17087794 (+)
G85876 NA non-coding upstream 466510 17036572 ~ 17042575 (+)
G85999 NA non-coding downstream 3833 17513128 ~ 17513621 (+)
G86006 NA non-coding downstream 17431 17526726 ~ 17527126 (+)
G86007 NA non-coding downstream 23324 17532619 ~ 17532820 (+)
G86018 NA non-coding downstream 72012 17581307 ~ 17585472 (+)
G86020 NA non-coding downstream 105319 17614614 ~ 17616453 (+)
AMCG00021441 NA other upstream 35689 17470325 ~ 17473396 (+)
G85869 NA other upstream 504954 16997877 ~ 17004131 (+)
G85787 NA other upstream 795047 16656644 ~ 16714038 (+)
G85764 LOC103366846,LOC106930986 other upstream 916112 16590181 ~ 16592973 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 1435464 16063499 ~ 16073621 (+)
G86121 NA other downstream 739195 18248490 ~ 18249686 (+)
AMCG00021472 NA other downstream 1537754 19047049 ~ 19055103 (+)
AMCG00021485 NA other downstream 1770470 19279765 ~ 19294779 (+)
G86407 NA other downstream 1990505 19499800 ~ 19501242 (+)
G86601 NA other downstream 2833315 20342610 ~ 20401249 (+)

Expression


Co-expression Network