G85764 (LOC103366846,LOC106930986)


Basic Information

Item Value
gene id G85764
gene name LOC103366846,LOC106930986
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16590181 ~ 16592973 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107049
CTTGAAGACGTTGATGGGGATTGCAATGAGGATGTAGAGCAGGTCTCCGAGAGCCAGGCTGGCAATGAGCACGTTGGGGCCATTGCGCATGCACTTGTTCTTGTAGATGATGCGCAGTAGGGTGGAGTTCCCGATGATGCCGACCACGAAGATGAGGCAGGACACCACGGTGTTGATGTACTTGAAGGCGTGCTTGATCTCCGTGGGCTTCACGCACATGGGGGGGTAAGGGCCAatgcgggggggcgggggtttGGCAGGGACGTCCGAGGAGCTGTTCCAAGCCACCTCCACAGCTGCCGCCACTCCCGCGCCCACCGGTCCTGCGTTCTCCCTGGGACTCGTCTGCGTGGTGTCACGAGGGAAGCGAGTGGCTGCTGAGCCCCCCAGGTACAGCACCAGTAGGGACAGCAGCAGCGTGGCCTTCATTGTGCTCAGTGGGGGAAGGGAGGGTGTGTGGGAGCGCCTGGATGTGAGAttggggttggggtgggggggacagggaTGGAGGGAGGTGTGGGGCGGTCAGTCGTGTGTTCAGATGAAGGTTCTCGTCTAGGCACTATCctgcagaacaaacaaaatcacagtAGGGtcattgtctgtctgtccctctgtctcctACGCAGCCACAGACCTCTGAGGGAAGAGCACAGAAGATGACAGTGGACTGTAATCAATCTTTAAACACATTACTGACTGGGTGATTCATGGGTACAAGCTAGCAGTGCGTACCTATCAGCAGCACACATGCAGGGTGAGTTTGAGACAGGCAGAGGGGTGTATTCCCATCGGCCTGTCCTGGTATTGAGCCTCTCACTGTTGCACAAGTGGGCACTCCTTGGCTGGCGTGTCACTGTAGTGCAATGGCGGTTGTGCCATGGTGGTTTGTAGCTCTGTATGCTTATGACAGGTTTGACAGCACTCCCTAAACCAATCAGTGTGCATTCATGTGCGTTTCTTCCAGAGAGGACTGGACACTGGCAATACATCATGGGGCAAAAAAGACAACCTAGAAGTatgtgacagtactttttgcatttatattactggatatacattatttttatggtagtatgcaggttaatatcagtgatagtttgtaatcgaagtagtgtagtgtaatatagGTTAGGAATTGCATGCATCAGTAGCAATATGTAAAAGTAAGGAGGTTAGCAGCTGTATTATAATATCAGGTATGTGCATGATAGTATGTAAGTTACTGTAAGTAACTGCAAGTATTATTTatcatacaatggaaatagccCAATGAGTAATTAGGCTGTTTTTACATAATAACCGTTTTATGATATGCAAATATGAGCCCAATAATGAAAAGAGAGTGGAGTAGAATGCAGCTTAAAACTGTCATAAgggaaaataagaaatgtcTTATGGGACCAGGGGCCAAATATGAGGCTGTGACACTTTTGTCCCCTACtagaaaaaatacagtaaatcatAGTGGTGTGTAGCATGTTAAACATGTAATATATGGTAAAGTGTAATATGATGTAACGTGGTAAAAACAAGGGGACATCTTGTAAAAACATTGGGAAATcatggtaaaaacatggtaaCATTTGGTTAAAATGTGGTAAATACATGGTAGAAATTTGCAGAGACCCAGAGCTGTCAGTTGCTCAGTCCCATAGCTGACTATCACCTTCATGTCTCCCTTTCTCTATATCTCAGTCATCACTGTTATAACACATTTGCAATCATTAATTTTGTATCGTTGAGGTTTGATGTCCCTCAGATCGTGGTCACTTTGGAATCTTAAGCAGAGGTGGAGAATTTGAGGTCCACCCCAGGACACGGTACTGTGTTACAATGCTACCACAGTAGCACTATACactttactgttgtttttaccacagtgcAGCACACTACATTTTACCATGTTGTTACTACAGTACACCACACCAAACTTTACTCTGATTGTAGCATTGTACACCACACTACTTCACTGTTTTTCACCACGGTTCATTACACTACATTTGATCGTGTTGTTACCACAGCGCAGCACACCGCCATCATGCACGGATGCCTGGAAACACAGATCACTGTTCTTCACAGGACCACTTCCACCTTTGCTCTTTGctcttgctgttgttgttgtttaatataCATCTGTTTTAATTGTAACTGCCTGTGGCGGGAAGTGAAGGAAACATTCccattaattgcattttcttagtattattctattaattgcatttttttatcaATAAAGGCCCTTTACCCCCCTGTGAAATAATCACTATACATAATCCTAGAGATGAATtccactgtatactgtatatgccACTGGTACTGTATATAGACCCATGCTTCTCTGTGCCATAGACTCGTGCGTGTCATTCAATTGCACCCATGACATCGATCATGGGGCCCATATTGTTGCCGAGCGATTCCTGGTCTCGGGCAGCTATCACAAGTTCGCTCCCTTCTCCACGCGCCTCCTAGCCTCTCAATGGACTGATTGACTGTCTGAACATCTGCAGGGCACACATGAGCCCCCAGGCCAGTCAGGGActttgattaatatattttttcctactgagacaaaaaaaaaatcaaacaacgAACTCTAGCATTCCTTGTCAAAAGACCCTAGGGGTACAACCACTGTGGGACCATACCGGGGTAACAGTAagcactctctccctctttcttcctctcatCTTCCTCTCATCTCTTTTTCACTTGCTTTTTTTGCATCCCTCTCACCATCCCTCTACCATCCCTGGAAGTCTCAATGGGTTTTACTTTTGCTgtaataaaaag

Function

NR:

description
PREDICTED: endothelin B receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107049 True 2793 TUCP 0.46 1 16590181 16592973

Neighbor

gene id symbol gene type direction distance location
AMCG00021403 NA coding upstream 10637 16573928 ~ 16579544 (+)
AMCG00021401 NA coding upstream 28405 16556598 ~ 16561776 (+)
AMCG00021399 nup62,LOC100135786,LOC106603332 coding upstream 34536 16550033 ~ 16555645 (+)
AMCG00021400 cnga2,LOC103395327 coding upstream 44682 16541957 ~ 16545499 (+)
AMCG00021402 NA coding upstream 54365 16531948 ~ 16535816 (+)
AMCG00021407 LOC105927798,LOC100704732,LOC103366304,LOC102229095,LOC107386560,LOC101162152,LOC101061287 coding downstream 43382 16636355 ~ 16642487 (+)
AMCG00021408 NA coding downstream 60467 16653440 ~ 16655886 (+)
AMCG00021415 NA coding downstream 161960 16754933 ~ 16756372 (+)
AMCG00021416 NA coding downstream 185609 16778582 ~ 16790852 (+)
AMCG00021417 NA coding downstream 204685 16797658 ~ 16806805 (+)
G85763 LOC105929187 non-coding upstream 770 16586317 ~ 16589411 (+)
G85760 NA non-coding upstream 5416 16584317 ~ 16584765 (+)
G85758 NA non-coding upstream 17313 16572193 ~ 16572868 (+)
G85757 NA non-coding upstream 20531 16569447 ~ 16569650 (+)
G85746 NA non-coding upstream 40836 16547657 ~ 16549345 (+)
G85766 NA non-coding downstream 3228 16596201 ~ 16596902 (+)
G85784 NA non-coding downstream 54166 16647139 ~ 16649848 (+)
G85823 NA non-coding downstream 214833 16807806 ~ 16809314 (+)
G85876 NA non-coding downstream 443599 17036572 ~ 17042575 (+)
G85903 NA non-coding downstream 493779 17086752 ~ 17087794 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 516560 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 1157817 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2517056 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 2556624 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 3152773 13435307 ~ 13437408 (+)
G85787 NA other downstream 63671 16656644 ~ 16714038 (+)
G85869 NA other downstream 404904 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 877352 17470325 ~ 17473396 (+)
G86121 NA other downstream 1655517 18248490 ~ 18249686 (+)
AMCG00021472 NA other downstream 2454076 19047049 ~ 19055103 (+)

Expression


Co-expression Network